1PII,1A53,1I4N,1JCM,1LBL,1VC4


Conserved Protein Domain Family
IGPS

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cd00331: IGPS 
Click on image for an interactive view with Cn3D
Indole-3-glycerol phosphate synthase (IGPS); an enzyme in the tryptophan biosynthetic pathway, catalyzing the ring closure reaction of 1-(o-carboxyphenylamino)-1-deoxyribulose-5-phosphate (CdRP) to indole-3-glycerol phosphate (IGP), accompanied by the release of carbon dioxide and water. IGPS is active as a separate monomer in most organisms, but is also found fused to other enzymes as part of a bifunctional or multifunctional enzyme involved in tryptophan biosynthesis.
Statistics
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PSSM-Id: 238203
Aligned: 133 rows
Threshold Bit Score: 172.648
Created: 6-Mar-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 17 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:
  • Structure:1LBL; Sulfolobus solfataricus IGPS with bound CdRP substrate; contacts at 3.5A
  • Comment:The IGPS active site consists of four subsites: the phosphate-binding site, the ribulose/triose-binding site, the anthranilate (substrate)- binding pocket and the indole (product)-binding pocket.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                         # #  ###                                   #                  
1PII         39 FYDALQga----rTAFILECKKASPSkgvirdDFDPARIAAIYKHy---aSAISVLTDEKyFQGSFNFLPIVSQia---- 107 Escherichia coli
1LBL_A       32 LNERILefnkrniTAIIAEYKRKSPSgl--dvERDPIEYSKFMERy---aVGLSILTEEKyFNGSYETLRKIASsv---- 102 Sulfolobus solfa...
CAC11937     26 LRRAIElcngegrRGLIAEYKRRSPSgf---sTDEDISSYLSYVKmh-riAGLSILSEPThFSGSFDDVTLAHRig---- 97  Thermoplasma aci...
BAB60193     26 LKERIIelnrsgkRGVIAEYKRRSPSgl---kVDYSIEDYLSYVMeh-riAGLSILTEPSfFNGSFQDVVVAHRyn---- 97  Thermoplasma vol...
AAO90665     36 FKRIISst----pTTIIAEIKRRSPSkghlaeIADPVALAKQYVQgg--aAGVSVLTDKLaFDGSIRDLQQVSLelrd-- 107 Coxiella burneti...
AAP05306     47 FATALKep----gLSIIGEIKRQSPTrgkirsIDSPADLALKYCCgg--aSAISVLTDTQgFGGSFLDMQQVNQklqsqy 120 Chlamydophila ca...
AAP76599     36 IKPHLDs------VFFIAEIKRSSPSagtikeIPSVTKLAGDYLNgg--vGAISVLCEEHyFGGSLLDLMSVKSayp--- 104 Helicobacter hep...
AAT42925     33 MNFNLNk-----kIGIIAEFKRRSPSgf---vNNENTDIFKYYDVihnsiAGMSILTEERyFNGNQMDVVSVQRyn---- 100 Picrophilus torr...
ABB40274     36 FSQALRrp----gLVTIAEYKRASPSkgdiapELTPEQVAAAYAGag--aGALSVLTEETyFRGSLGYLERMAFcg---- 105 Desulfovibrio de...
ZP_01195894  86 AASFKAng----aPGIIAELKGGSPFdpsfrtMVPYKALAEDFDAvg--aAALSVAVERQaFRGSYSDLATVRDav---- 155 Xanthobacter aut...
Feature 1              # #                    #                              #                  
1PII        108 -pqPILCKDFIIDPYQIYLARyyqadACLLMLSVLdd-----dQYRQLAAVAHSLEMGVLTEVSNEEEQERAIalgaKVV 181 Escherichia coli
1LBL_A      103 -siPILMKDFIVKESQIDDAYnlgadTVLLIVKILte-----rELESLLEYARSYGMEPLIEINDENDLDIALrigaRFI 176 Sulfolobus solfa...
CAC11937     98 --vPVLVKDFAPDDHFVESAYnaggdAVLAILDFLps-----eDVERIVRRSADLGMDVIEEYHDRKALKKFVdgdnVIL 170 Thermoplasma aci...
BAB60193     98 --iPILVKDFVPDSEFVDYGFnaggdAVLVILDFLdy-----eSIKRIVERAADLGMDVLEEFHNQDALKRQYirdnVMI 170 Thermoplasma vol...
AAO90665    108 rpvAVLRKDFILDPLQIEEAAvagadAILLIVAILk------dATKILLQKAHECGLEALVEVHNRQELDQAIeigaEII 181 Coxiella burneti...
AAP05306    121 shvSVLRKDFILHPLQLAEAIffgahAVLLIVSVVg------eNLKFLIQEAQRLGLEVLTEIHDLSELELALeaeaPII 194 Chlamydophila ca...
AAP76599    105 -naCILRKDFIQYPQEVDVSYragadMVLLIVAMFinedggfsHFKMIYEECLKVGITPLIEVHTQAEIDFIAplqaPLI 183 Helicobacter hep...
AAT42925    101 --iPILIKDFVSNDEMIESSYmiggdVILLIADFLer-----dKIEMLNRKIKSLGMEALIEFHDLKAFERITtdenVII 173 Picrophilus torr...
ABB40274    106 --lPMLRKDFILHPLQVVQTAatpasALLLVVRMLeg----adGVRRLIEAAHEKSLEAVVEVFDEQDLEIARkagaRII 179 Desulfovibrio de...
ZP_01195894 156 -diPLLAQDIIFDLYQILEARlagadAVVLSAALLg------pQLAEFRERAASVAMDALVQVHTPQEVEAALaagaDFV 228 Xanthobacter aut...
Feature 1         # # #                              ##                    ##               
1PII        182 GINNRDLrdLSIDl---nRTRELApklg-hnvTVISESGINTyAQVRELSHf-ANGFLIGSALMAHddlhAAVRRV 252 Escherichia coli
1LBL_A      177 GINSRDLetLEINk---eNQRKLIsmip-snvVKVAESGISErNEIEELRKlgVNAFLIGSSLMRNp---EKIKEF 245 Sulfolobus solfataricus
CAC11937    171 GYNRRDLvsLKTG-----EDQDMPqy-----dITILESGINI-DNVVHVDMr-YSGFLIGTSILKRd---GTLEYL 231 Thermoplasma acidoph...
BAB60193    171 GYNRRDLtnLLMDe----KIPDFSg------eVRILESGISI-DNVKNLDLk-FQGYLIGTSILKKd---GTLEYL 231 Thermoplasma volcani...
AAO90665    182 GVNNRNLttFSVDp---nNALKLKpyip-dhiISVAESGIHTvSDAKRYISagYNAVLVGEALVKSenpqQFISAI 253 Coxiella burnetii RS...
AAP05306    195 GVNHRNLqtFEIDl---nLSEILKpfip-pqiITVAESGIHHpTQAKRMRElgFDAILVGEALVSSkdpsLLIKQM 266 Chlamydophila caviae...
AAP76599    184 GINSRSLhtFEINi---pAACALKnal--shsKIIFESGIDSpYSAFIIGSldFDGLLCGSYLVSHknptTALQSL 254 Helicobacter hepatic...
AAT42925    174 GYNRRNLktLKIEdesfdAQDLIRst----glLSVLESGITS-ENILKMPR--YNAMLIGSSILSNdsvlKSAGMI 242 Picrophilus torridus...
ABB40274    180 QVNNRDLstLRTSl---aISGRLVkerd-aaeCWISASGITGtNHRKYVEAlgFDAMLVGTVLMSGgdpaGNLVRL 251 Desulfovibrio desulf...
ZP_01195894 229 CATNRNIhtFELVp---gTCETLIplipaakaLVVAEGGLGTaADRERLGAagAKALLIGTAMMKDadpaGVLEQV 301 Xanthobacter autotro...

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