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Report for CCDS91757.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91757.1 Public Homo sapiens 12 BICDL1 24 110 108 CCDS HistoryNCBI Gene:92558Re-query CCDS DB by CCDS ID:91757.1Re-query CCDS DB by GeneID:92558See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 91757.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000548673.6 ENSP00000447477.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000548673.6Link to Ensembl Protein Viewer:ENSP00000447477.2Re-query CCDS DB by Nucleotide ID:ENST00000548673Re-query CCDS DB by Protein ID:ENSP00000447477
Original member Current member NCBI NM_001367886.1 NP_001354815.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001367886.1Link to Protein Sequence:NP_001354815.1Re-query CCDS DB by Nucleotide ID:NM_001367886Re-query CCDS DB by Protein ID:NP_001354815Link to BLAST:NP_001354815.1

Chromosomal Locations for CCDS 91757.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 119989869 119990297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 119998521 119998736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120061710 120061826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120064733 120064879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120071622 120071801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120072511 120072729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120074443 120074586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120080887 120081017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120089951 120090071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120093000 120093161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1866 nt):
ATGTCCGCTTTCTGCCTGGGCTTGGTCGGCCGCGCTTCAGCACCCGCCGAGCCGGACAGCGCCTGCTGCA
TGGAGCTGCCCGCCGCGGCCGGGGACGCAGTCCGGAGTCCCGCCGCCGCCGCCGCCCTCATCTTCCCCGG
GGGCTCCGGGGAGCTAGAACTGGCGTTAGAGGAGGAGCTGGCGCTGCTGGCGGCCGGGGAGCGGCCGTCC
GACCCCGGGGAACACCCTCAGGCCGAGCCTGGGTCTCTGGCCGAGGGGGCCGGACCGCAGCCGCCGCCCT
CCCAGGACCCCGAGCTGCTGTCGGTGATCCGACAGAAGGAGAAGGATCTGGTGTTGGCGGCCCGGCTGGG
TAAGGCGCTGCTCGAGAGGAACCAGGACATGAGCCGGCAGTACGAGCAGATGCATAAGGAGCTGACAGAC
AAGCTCGAGCACTTAGAGCAAGAGAAACATGAATTGAGAAGACGATTTGAGAACCGAGAAGGGGAGTGGG
AAGGCCGAGTGTCAGAGCTGGAGAGTGATGTGAAGCAGCTACAGGATGAGTTGGAGAGGCAGCAGATTCA
TCTGCGGGAAGCAGATCGAGAAAAATCACGGGCTGTCCAGGAACTGTCGGAACAGAACCAAAGGCTATTG
GATCAGCTCAGCAGGGCATCAGAAGTTGAGAGACAACTCTCCATGCAGGTCCACGCCCTCAGAGAAGACT
TTCGGGAGAAAAACTCATCAACCAACCAGCACATTATCCGGCTGGAGAGCCTTCAGGCCGAGATCAAGAT
GCTGTCAGATCGGAAACGGGAGCTGGAGCATCGTCTCAGCGCTACTTTAGAGGAAAATGACCTGCTCCAA
GGGACCGTGGAGGAGCTACAGGACCGGGTGCTAATCCTGGAGAGGCAGGGCCATGACAAGGACCTACAGC
TGCACCAAAGCCAGCTGGAGCTTCAGGAGGTGCGTCTCTCCTGCCGACAGCTGCAGGTGAAGGTGGAAGA
ACTCACTGAGGAGAGGAGTCTGCAGAGCTCTGCCGCCACCAGCACATCCCTCCTGTCAGAGATCGAGCAG
AGCATGGAGGCTGAGGAGCTGGAGCAGGAGCGAGAGCAGCTGAGACTGCAGCTCTGGGAAGCCTACTGCC
AGGTTCGCTATCTGTGCTCACACCTTCGAGGCAATGACAGTGCTGACTCAGCCGTCTCCACGGACTCCTC
CATGGACGAGTCTTCAGAAACCTCGTCCGCCAAGGATGTGCCAGCCGGCAGCTTGCGCACTGCCCTCAAT
GAGCTCAAGAGACTGATACAGAGCATTGTGGATGGCATGGAGCCCACGGGCTCCCGGAGACTTGATGATG
ACTCCTTAGAAGAACAGATAAGGCAGACCAGTGAGGACTCGAGAGCCCTAAGGGAGCTCATGGAGGGAGA
GAGGGGTAAACTGAGGCAAAGCCTAGAAGAGCTGCAGCGACTCCACAGTCAGGTGACACTGCTGAGTGTG
GAGATGACTGCCCTAAAAGAGGAGAGAGACCGACTCAGAGTCACTTCTGAGGACAAGGAGCCAAAGGAGC
AGCTTCAGAAGGCCATCAGGGACCGCGACGAGGCCATTGCAAAGAAGAATGCTGTGGAGCTGGAACTTGC
CAAGTGCAGGATGGATATGATGTCTCTGAACAGCCAGTTGCTGGATGCCATTCAGCAGAAACTGAACCTC
TCGCAGCAGCTGGAAGCTTGGCAGGATGACATGCACAGGGTCATTGACCGGCAGCTGATGGACACGCACC
TGAAAGAACGGAGCCAGCCGGCTGCTGCCCTCTGCAGGGGCCACAGCGCTGGGCGGGGGGATGAGCCCAG
CATCGCTGAAGGCAAACGACTCTTCTCATTCTTCAGGAAAATTTAA

Translation (621 aa):
MSAFCLGLVGRASAPAEPDSACCMELPAAAGDAVRSPAAAAALIFPGGSGELELALEEELALLAAGERPS
DPGEHPQAEPGSLAEGAGPQPPPSQDPELLSVIRQKEKDLVLAARLGKALLERNQDMSRQYEQMHKELTD
KLEHLEQEKHELRRRFENREGEWEGRVSELESDVKQLQDELERQQIHLREADREKSRAVQELSEQNQRLL
DQLSRASEVERQLSMQVHALREDFREKNSSTNQHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQ
GTVEELQDRVLILERQGHDKDLQLHQSQLELQEVRLSCRQLQVKVEELTEERSLQSSAATSTSLLSEIEQ
SMEAEELEQEREQLRLQLWEAYCQVRYLCSHLRGNDSADSAVSTDSSMDESSETSSAKDVPAGSLRTALN
ELKRLIQSIVDGMEPTGSRRLDDDSLEEQIRQTSEDSRALRELMEGERGKLRQSLEELQRLHSQVTLLSV
EMTALKEERDRLRVTSEDKEPKEQLQKAIRDRDEAIAKKNAVELELAKCRMDMMSLNSQLLDAIQQKLNL
SQQLEAWQDDMHRVIDRQLMDTHLKERSQPAAALCRGHSAGRGDEPSIAEGKRLFSFFRKI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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