JAZF1 JAZF zinc finger 1 [Pongo abelii (Sumatran orangutan)] - Gene

Summary

Gene symbol: JAZF1
Gene description: JAZF zinc finger 1
Locus tag: CR201_G0019442
See related: Ensembl:ENSPPYG00000017691
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Pongo abelii
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 6

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2)	6	NC_071991.2 (56973926..57328042)
RS_2023_04	previous assembly	NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1)	7	NC_071992.1 (50796434..51150553)

Chromosome 6 - NC_071991.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

GDB:4585731 (e-PCR)
- UniSTS:18956

D7S1535 (e-PCR)
- UniSTS:19996

STS-T95652 (e-PCR)
- UniSTS:797

D7S1808 (e-PCR)
- UniSTS:25378

D7S516 (e-PCR)
- UniSTS:14629

RH92604 (e-PCR)
- UniSTS:90661

D7S1808 (e-PCR)
- UniSTS:46631

D7S1987 (e-PCR)
- UniSTS:31274

WI-14586 (e-PCR)
- UniSTS:82483

G49448 (e-PCR)
- UniSTS:109187

G49453 (e-PCR)
- UniSTS:109192

D7S516 (e-PCR)
- UniSTS:43429

D7S1590 (e-PCR)
- UniSTS:19372

RH36495 (e-PCR)
- UniSTS:31424

RH120726 (e-PCR)
- UniSTS:132807

GDB:1318436 (e-PCR)
- UniSTS:7887

G42089 (e-PCR)
- UniSTS:93135

WI-22677 (e-PCR)
- UniSTS:12241

SHGC-58372 (e-PCR)
- UniSTS:62182

D7S1569 (e-PCR)
- UniSTS:57838

Gene Ontology Provided by RefSeq

Component	Evidence Code	Pubs
located_in nucleus	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: juxtaposed with another zinc finger protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001131604.1 → NP_001125076.1 juxtaposed with another zinc finger protein 1

See identical proteins and their annotated locations for NP_001125076.1

Status: PROVISIONAL

Source sequence(s)

CR857957

UniProtKB/Swiss-Prot

Q5RDF5

UniProtKB/TrEMBL

A0A2J8VDP8, H2PMJ1

Related

ENSPPYP00000019829.2, ENSPPYT00000020612.2

Conserved Domains (1) summary

COG5189
Location:169 → 230

SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

NC_071991.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Range

56973926..57328042

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_054558858.2 → XP_054414833.1 juxtaposed with another zinc finger protein 1 isoform X2

UniProtKB/TrEMBL

A0A2J8VDQ3
XM_063725473.1 → XP_063581543.1 juxtaposed with another zinc finger protein 1 isoform X1

UniProtKB/TrEMBL

A0A2J8VDQ3, H2PMJ2