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    IFI16 interferon gamma inducible protein 16 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

    Gene ID: 100607897, updated on 8-Mar-2024

    Summary

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    Gene symbol
    IFI16
    Gene description
    interferon gamma inducible protein 16
    See related
    EnsemblRapid:ENSNLEG00000013156
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nomascus leucogenys
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
    Orthologs
    human all
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    Genomic context

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    See IFI16 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Asia_NLE_v1 (GCF_006542625.1) 12 NC_044392.1 (42405627..42446366, complement)
    102 previous assembly Nleu_3.0 (GCF_000146795.2) 12 NC_019827.1 (43374490..43415203, complement)

    Chromosome 12 - NC_044392.1Genomic Context describing neighboring genes Neighboring gene cell cycle checkpoint protein RAD1 pseudogene Neighboring gene absent in melanoma 2 Neighboring gene uncharacterized LOC115837617 Neighboring gene pyrin domain containing 5 Neighboring gene pyrin and HIN domain family member 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables double-stranded DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in activation of innate immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to interferon-beta IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of interleukin-1 beta production IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    gamma-interferon-inducible protein 16

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Asia_NLE_v1 Primary Assembly

    Genomic

    1. NC_044392.1 Reference Asia_NLE_v1 Primary Assembly

      Range
      42405627..42446366 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030824150.1 → XP_030680010.1  gamma-interferon-inducible protein 16 isoform X2

      UniProtKB/TrEMBL
      G1RRT8
      Related
      ENSNLEP00000015956.4, ENSNLET00000016771.4
      Conserved Domains (3) summary
      PRK12373
      Location:82 → 181
      PRK12373; NADH-quinone oxidoreductase subunit E
      cd08305
      Location:14 → 87
      Pyrin; a protein-protein interaction domain
      pfam02760
      Location:460 → 626
      HIN; HIN-200/IF120x domain

    2. XM_003258677.2 → XP_003258725.1  gamma-interferon-inducible protein 16 isoform X1

      UniProtKB/TrEMBL
      G1RRT9
      Related
      ENSNLEP00000015957.4, ENSNLET00000016772.4
      Conserved Domains (3) summary
      PRK12373
      Location:82 → 181
      PRK12373; NADH-quinone oxidoreductase subunit E
      cd08305
      Location:14 → 87
      Pyrin; a protein-protein interaction domain
      pfam02760
      Location:516 → 682
      HIN; HIN-200/IF120x domain

    3. XM_030824152.1 → XP_030680012.1  gamma-interferon-inducible protein 16 isoform X3

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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