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    etv4 ETS variant transcription factor 4 [ Gasterosteus aculeatus (three-spined stickleback) ]

    Gene ID: 120819036, updated on 21-Mar-2024

    Summary

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    Gene symbol
    etv4
    Gene description
    ETS variant transcription factor 4
    See related
    EnsemblRapid:ENSGACG00000003724
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gasterosteus aculeatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Gasterosteus
    Orthologs
    human zebrafish all
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    100 current GAculeatus_UGA_version5 (GCF_016920845.1) 5 NC_053216.1 (6676976..6701708, complement)

    Chromosome 5 - NC_053216.1Genomic Context describing neighboring genes Neighboring gene ATP-dependent RNA helicase DHX8 Neighboring gene ATP-dependent RNA helicase DHX8-like Neighboring gene mesenchyme homeobox 1 Neighboring gene sclerostin

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_053216.1 Chromosome 5 Reference GAculeatus_UGA_version5 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ETS translocation variant 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gasterosteus aculeatus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GAculeatus_UGA_version5 Primary Assembly

    Genomic

    1. NC_053216.1 Reference GAculeatus_UGA_version5 Primary Assembly

      Range
      6676976..6701708 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040176026.1 → XP_040031960.1  ETS translocation variant 4

      UniProtKB/TrEMBL
      G3NHT4
      Related
      ENSGACP00000062612.1, ENSGACT00000045659.1
      Conserved Domains (1) summary
      smart00413
      Location:385 → 469
      ETS; erythroblast transformation specific domain

    2. XM_040176025.1 → XP_040031959.1  ETS translocation variant 4

      UniProtKB/TrEMBL
      G3NHT4
      Related
      ENSGACP00000065123.1, ENSGACT00000031643.1
      Conserved Domains (1) summary
      smart00413
      Location:385 → 469
      ETS; erythroblast transformation specific domain

    3. XM_040176022.1 → XP_040031956.1  ETS translocation variant 4

      UniProtKB/TrEMBL
      G3NHT4
      Related
      ENSGACP00000004894.2, ENSGACT00000004908.2
      Conserved Domains (1) summary
      smart00413
      Location:385 → 469
      ETS; erythroblast transformation specific domain
    Nucleotide Protein Strain
    Heading Accession and Version

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