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    Zfhx4 zinc finger homeobox 4 [ Dipodomys ordii (Ord's kangaroo rat) ]

    Gene ID: 105994788, updated on 13-Mar-2024

    Summary

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    Gene symbol
    Zfhx4
    Gene description
    zinc finger homeobox 4
    See related
    Ensembl:ENSDORG00000016167
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Dipodomys ordii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267325.1 (5909736..6101016)

    NW_012267325.1Genomic Context describing neighboring genes Neighboring gene hepatocyte nuclear factor 4 gamma Neighboring gene 40S ribosomal protein S3 pseudogene Neighboring gene peroxisomal biogenesis factor 2 Neighboring gene 60S ribosomal protein L17 pseudogene

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_012267325.1 Unplaced Scaffold Reference Dord_2.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger homeobox protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Dord_2.0

    Genomic

    1. NW_012267325.1 Reference Dord_2.0

      Range
      5909736..6101016
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013028432.1 → XP_012883886.1  zinc finger homeobox protein 4

      UniProtKB/TrEMBL
      A0A1S3G4Z7
      Related
      ENSDORP00000015208.2, ENSDORT00000016167.2
      Conserved Domains (6) summary
      PHA02682
      Location:2352 → 2508
      PHA02682; ORF080 virion core protein; Provisional
      smart00389
      Location:2132 → 2187
      HOX; Homeodomain
      COG5576
      Location:2103 → 2242
      COG5576; Homeodomain-containing transcription factor [Transcription]
      sd00017
      Location:1548 → 1570
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00020
      Location:1404 → 1424
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00046
      Location:2231 → 2284
      Homeobox; Homeobox domain
    Nucleotide Protein
    Heading Accession and Version

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