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RUVBL1 RuvB like AAA ATPase 1 [ Canis lupus familiaris (dog) ]

Gene ID: 476512, updated on 17-Aug-2024

Summary

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Official Symbol
RUVBL1provided by VGNC
Official Full Name
RuvB like AAA ATPase 1provided by VGNC
Primary source
VGNC:VGNC:45811
See related
Ensembl:ENSCAFG00845018527
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 20
Exon count:
11
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 20 NC_051824.1 (2117012..2159070, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 20 NC_006602.4 (2132722..2174676, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 20 NC_049241.1 (2124982..2166796, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 20 NC_049280.1 (1837866..1879813, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 20 NC_049761.1 (2164688..2206489, complement)

Chromosome 20 - NC_051824.1Genomic Context describing neighboring genes Neighboring gene kelch repeat and BTB domain containing 12 Neighboring gene SEC61 translocon subunit alpha 1 Neighboring gene nascent polypeptide-associated complex subunit alpha-like Neighboring gene eukaryotic elongation factor, selenocysteine-tRNA specific Neighboring gene uncharacterized LOC102155942

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Assembly of the β4-Integrin Interactome Based on Proximal Biotinylation in the Presence and Absence of Heterodimerization. Myllymäki SM, et al. Mol Cell Proteomics, 2019 Feb. PMID 30404858, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in box C/D snoRNP assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Ino80 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of NuA4 histone acetyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of R2TP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of Swr1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ruvB-like 1
Names
RuvB-like 1
XP_038282679.1
XP_038358487.1
XP_038421397.1
XP_038485519.1
XP_848712.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051824.1 Reference ROS_Cfam_1.0

    Range
    2117012..2159070 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038426751.1 → XP_038282679.1  ruvB-like 1

    UniProtKB/TrEMBL
    A0A8C0JVE0, A0A8I3P6G1, A0A8P0N702
    Related
    ENSCAFP00845025642.1, ENSCAFT00845032770.1
    Conserved Domains (1) summary
    COG1224
    Location:2 → 455
    TIP49; DNA helicase TIP49, TBP-interacting protein [Transcription]

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049280.1 Alternate UMICH_Zoey_3.1

    Range
    1837866..1879813 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038502559.1 → XP_038358487.1  ruvB-like 1

    Conserved Domains (1) summary
    COG1224
    Location:2 → 455
    TIP49; DNA helicase TIP49, TBP-interacting protein [Transcription]

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049761.1 Alternate UNSW_CanFamBas_1.0

    Range
    2164688..2206489 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038629591.1 → XP_038485519.1  ruvB-like 1

    Conserved Domains (1) summary
    COG1224
    Location:2 → 455
    TIP49; DNA helicase TIP49, TBP-interacting protein [Transcription]

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049241.1 Alternate UU_Cfam_GSD_1.0

    Range
    2124982..2166796 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038565469.1 → XP_038421397.1  ruvB-like 1

    UniProtKB/TrEMBL
    A0A8C0JVE0, A0A8I3P6G1, A0A8P0N702
    Conserved Domains (1) summary
    COG1224
    Location:2 → 455
    TIP49; DNA helicase TIP49, TBP-interacting protein [Transcription]

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006602.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    2132722..2174676 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_843619.5 → XP_848712.1  ruvB-like 1

    See identical proteins and their annotated locations for XP_848712.1

    UniProtKB/TrEMBL
    A0A8C0JVE0, A0A8I3P6G1, A0A8P0N702
    Conserved Domains (1) summary
    COG1224
    Location:2 → 455
    TIP49; DNA helicase TIP49, TBP-interacting protein [Transcription]
Nucleotide Protein
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