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ELL2 elongation factor for RNA polymerase II 2 [ Gallus gallus (chicken) ]

Gene ID: 427119, updated on 17-Aug-2024

Summary

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Symbol
ELL2provided by CGNC
Full Name
elongation factor for RNA polymerase II 2provided by CGNC
Primary source
CGNC:10880
See related
Ensembl:ENSGALG00010012711
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Z
Exon count:
16
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) Z NC_052572.1 (58081286..58137707)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) Z NC_059536.1 (58081286..58137707)

Chromosome Z - NC_052572.1Genomic Context describing neighboring genes Neighboring gene proprotein convertase subtilisin/kexin type 1 Neighboring gene uncharacterized LOC121108264 Neighboring gene glutaredoxin Neighboring gene Rho related BTB domain containing 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in snRNA transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription elongation factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA polymerase II elongation factor ELL2
Names
elongation factor, RNA polymerase II, 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052572.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    58081286..58137707
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_424711.7 → XP_424711.2  RNA polymerase II elongation factor ELL2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YFI4
    Related
    ENSGALP00010017653.1, ENSGALT00010030436.1
    Conserved Domains (2) summary
    pfam07303
    Location:531 → 628
    Occludin_ELL; Occludin homology domain
    pfam10390
    Location:6 → 283
    ELL; RNA polymerase II elongation factor ELL

  2. XM_040655732.2 → XP_040511666.1  RNA polymerase II elongation factor ELL2 isoform X4

    UniProtKB/TrEMBL
    A0A8V0YFF8
    Conserved Domains (2) summary
    pfam07303
    Location:404 → 505
    Occludin_ELL; Occludin homology domain
    pfam10390
    Location:30 → 161
    ELL; RNA polymerase II elongation factor ELL

  3. XM_015280540.4 → XP_015136026.2  RNA polymerase II elongation factor ELL2 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YFG3
    Related
    ENSGALP00010017638.1, ENSGALT00010030415.1

  4. XM_025144981.3 → XP_025000749.1  RNA polymerase II elongation factor ELL2 isoform X4

    UniProtKB/TrEMBL
    A0A8V0YFF8
    Conserved Domains (2) summary
    pfam07303
    Location:404 → 505
    Occludin_ELL; Occludin homology domain
    pfam10390
    Location:30 → 161
    ELL; RNA polymerase II elongation factor ELL

  5. XM_046905537.1 → XP_046761493.1  RNA polymerase II elongation factor ELL2 isoform X4

    UniProtKB/TrEMBL
    A0A8V0YFF8

  6. XM_040655731.1 → XP_040511665.1  RNA polymerase II elongation factor ELL2 isoform X3

    UniProtKB/TrEMBL
    A0A8V0YFF8

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_059536.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    58081286..58137707
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046936922.1 → XP_046792878.1  RNA polymerase II elongation factor ELL2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YFI4

  2. XM_046936927.1 → XP_046792883.1  RNA polymerase II elongation factor ELL2 isoform X4

    UniProtKB/TrEMBL
    A0A8V0YFF8

  3. XM_046936923.1 → XP_046792879.1  RNA polymerase II elongation factor ELL2 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YFG3

  4. XM_046936925.1 → XP_046792881.1  RNA polymerase II elongation factor ELL2 isoform X4

    UniProtKB/TrEMBL
    A0A8V0YFF8

  5. XM_046936926.1 → XP_046792882.1  RNA polymerase II elongation factor ELL2 isoform X4

    UniProtKB/TrEMBL
    A0A8V0YFF8

  6. XM_046936924.1 → XP_046792880.1  RNA polymerase II elongation factor ELL2 isoform X3

    UniProtKB/TrEMBL
    A0A8V0YFF8
Nucleotide Protein Strain
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