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GTF2E1 general transcription factor IIE subunit 1 [ Saimiri boliviensis (Bolivian squirrel monkey) ]

Gene ID: 101048027, updated on 8-Mar-2024

Summary

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Gene symbol
GTF2E1
Gene description
general transcription factor IIE subunit 1
See related
EnsemblRapid:ENSSBOG00000021805
Gene type
protein coding
RefSeq status
MODEL
Organism
Saimiri boliviensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current BCM_Sbol_2.0 (GCF_016699345.1) Unplaced Scaffold NW_024100931.1 (30762199..30796832, complement)

NW_024100931.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L29-like Neighboring gene nucleosome assembly protein 1-like 1 Neighboring gene RAB, member of RAS oncogene family like 3 Neighboring gene homogentisate 1,2-dioxygenase Neighboring gene NADH:ubiquinone oxidoreductase subunit B4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024100931 Unplaced Scaffold Reference BCM_Sbol_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in transcription initiation at RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription open complex formation at RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription factor TFIIE complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
general transcription factor IIE subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Saimiri boliviensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Sbol_2.0 Primary Assembly

Genomic

  1. NW_024100931.1 Reference BCM_Sbol_2.0 Primary Assembly

    Range
    30762199..30796832 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003935399.2 → XP_003935448.1  general transcription factor IIE subunit 1

    UniProtKB/TrEMBL
    A0A2K6SR63
    Related
    ENSSBOP00000009875.1, ENSSBOT00000026643.2
    Conserved Domains (4) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam02002
    Location:16 → 123
    TFIIE_alpha; TFIIE alpha subunit
    pfam08271
    Location:127 → 174
    TF_Zn_Ribbon; TFIIB zinc-binding
    pfam11521
    Location:394 → 439
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha
Nucleotide Protein
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