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LOC100572650 Krueppel-like factor 6 [ Acyrthosiphon pisum (pea aphid) ]

Gene ID: 100572650, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100572650
Gene description
Krueppel-like factor 6
See related
EnsemblRapid:LOC100572650
Gene type
protein coding
RefSeq status
MODEL
Organism
Acyrthosiphon pisum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon
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Genomic context

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Location:
chromosome: A1
Exon count:
3
Annotation release Status Assembly Chr Location
103 current pea_aphid_22Mar2018_4r6ur (GCF_005508785.1) A1 NC_042494.1 (65929316..66147629)
102 previous assembly Acyr_2.0 (GCF_000142985.2) Unplaced Scaffold NW_003383618.1 (578460..796753)

Chromosome A1 - NC_042494.1Genomic Context describing neighboring genes Neighboring gene tigger transposable element-derived protein 4-like Neighboring gene 52 kDa repressor of the inhibitor of the protein kinase-like Neighboring gene uncharacterized LOC115033748 Neighboring gene uncharacterized LOC115033747 Neighboring gene uncharacterized LOC115033635 Neighboring gene uncharacterized LOC115033531

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Krueppel-like factor 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acyrthosiphon pisum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

Genomic

  1. NC_042494.1 Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

    Range
    65929316..66147629
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003242725.4 → XP_003242773.1  Krueppel-like factor 6

    UniProtKB/TrEMBL
    A0A8R2AAI7
    Related
    XP_003242773.1, XM_003242725.4
    Conserved Domains (2) summary
    COG5048
    Location:239 → 338
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:268 → 290
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases