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HOXC12 homeobox C12 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100412742, updated on 8-Mar-2024

Summary

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Gene symbol
HOXC12
Gene description
homeobox C12
See related
Ensembl:ENSCJAG00000018806
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 9 NC_071450.1 (62031938..62035954, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 9 NC_048391.1 (63156154..63160164, complement)

Chromosome 9 - NC_071450.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103795247 Neighboring gene homeobox C11 Neighboring gene uncharacterized LOC103795246 Neighboring gene homeobox C13 Neighboring gene uncharacterized LOC118144240

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox protein Hox-C12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071450.1 Reference mCalJa1.2.pat.X

    Range
    62031938..62035954 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002752541.6 → XP_002752587.1  homeobox protein Hox-C12

    See identical proteins and their annotated locations for XP_002752587.1

    UniProtKB/TrEMBL
    F7IAK9
    Related
    ENSCJAP00000034933.1
    Conserved Domains (1) summary
    cd00086
    Location:213 → 269
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
Nucleotide Protein
Heading Accession and Version

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