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TSG101 tumor susceptibility 101 [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100343429, updated on 6-Jun-2024

Summary

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Gene symbol
TSG101
Gene description
tumor susceptibility 101
See related
Ensembl:ENSOCUG00000013940
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) Unplaced Scaffold NW_026259180.1 (3362934..3407285, complement)

NW_026259180.1Genomic Context describing neighboring genes Neighboring gene lactate dehydrogenase A Neighboring gene L-lactate dehydrogenase C chain Neighboring gene uncharacterized LOC103352454 Neighboring gene UEV and lactate/malate dehyrogenase domains

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026259180 Unplaced Scaffold Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endosome to lysosome transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein modification process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ESCRT I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tumor susceptibility gene 101 protein
Names
tumor susceptibility gene 101

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NW_026259180.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    3362934..3407285 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051833951.1 → XP_051689911.1  tumor susceptibility gene 101 protein isoform X4

    UniProtKB/TrEMBL
    A0A5F9CE76

  2. XM_002721366.4 → XP_002721412.1  tumor susceptibility gene 101 protein isoform X3

    UniProtKB/TrEMBL
    A0A5F9CE76, G1T6E8
    Related
    ENSOCUP00000011983.2
    Conserved Domains (3) summary
    pfam05743
    Location:21 → 139
    UEV; UEV domain
    pfam07798
    Location:237 → 293
    DUF1640; Protein of unknown function (DUF1640)
    pfam09454
    Location:317 → 372
    Vps23_core; Vps23 core domain

  3. XM_051833950.1 → XP_051689910.1  tumor susceptibility gene 101 protein isoform X2

    UniProtKB/TrEMBL
    A0A5F9CE76

  4. XM_051833949.1 → XP_051689909.1  tumor susceptibility gene 101 protein isoform X1

    UniProtKB/TrEMBL
    A0A5F9CE76
Nucleotide Protein
Heading Accession and Version

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