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    STBD1 starch binding domain 1 [ Pan paniscus (pygmy chimpanzee) ]

    Gene ID: 100990942, updated on 8-Mar-2024

    Summary

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    Gene symbol
    STBD1
    Gene description
    starch binding domain 1
    See related
    Ensembl:ENSPPAG00000033341
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan paniscus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 3 NC_073252.2 (53754242..53766580, complement)
    RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 4 NC_073253.1 (53946865..53952342, complement)

    Chromosome 3 - NC_073252.2Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 158 Neighboring gene U6 spliceosomal RNA Neighboring gene sorting nexin-5-like Neighboring gene family with sequence similarity 47 member E Neighboring gene uncharacterized LOC134730191 Neighboring gene scavenger receptor class B member 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glycogen binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables starch binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    starch-binding domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Genomic

    1. NC_073252.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

      Range
      53754242..53766580 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003832290.6 → XP_003832338.1  starch-binding domain-containing protein 1

      UniProtKB/TrEMBL
      A0A2R9AWR4
      Related
      ENSPPAP00000020240.1
      Conserved Domains (1) summary
      cd05813
      Location:264 → 358
      CBM20_genethonin_1; Genethonin-1, C-terminal CBM20 (carbohydrate-binding module, family 20) domain. Genethonin-1 is a human skeletal muscle protein with no known function. It contains a C-terminal CBM20 domain. The CBM20 domain is found in a large number of starch ...
    Nucleotide Protein
    Heading Accession and Version

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