U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    AKIRIN1 akirin 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 607354, updated on 5-Mar-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    AKIRIN1provided by VGNC
    Official Full Name
    akirin 1provided by VGNC
    Primary source
    VGNC:VGNC:37765
    See related
    Ensembl:ENSCAFG00845030105
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 15
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 15 NC_051819.1 (3881467..3893614, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 15 NC_006597.4 (3997567..4009698, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 15 NC_049236.1 (3831983..3844112, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 15 NC_049275.1 (3748978..3761096, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 15 NC_049756.1 (3816581..3828699, complement)

    Chromosome 15 - NC_051819.1Genomic Context describing neighboring genes Neighboring gene microtubule-actin cross-linking factor 1-like Neighboring gene NADH:ubiquinone oxidoreductase subunit S5 Neighboring gene uncharacterized LOC102157317 Neighboring gene rhomboid like 2 Neighboring gene small nucleolar RNA U3

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription coregulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in myoblast migration involved in skeletal muscle regeneration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of skeletal muscle satellite cell proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of lamellipodium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of macrophage chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of myoblast differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of chromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    akirin-1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051819.1 Reference ROS_Cfam_1.0

      Range
      3881467..3893614 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038687474.1 → XP_038543402.1  akirin-1

      UniProtKB/TrEMBL
      A0A8C0NRY3, A0A8C0Q2M1, A0A8I3Q8B1
      Related
      ENSCAFP00845041927.1, ENSCAFT00845053371.1
      Conserved Domains (1) summary
      cd22243
      Location:2 → 192
      akirin-1

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049275.1 Alternate UMICH_Zoey_3.1

      Range
      3748978..3761096 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038495476.1 → XP_038351404.1  akirin-1

      Conserved Domains (1) summary
      cd22243
      Location:2 → 192
      akirin-1

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049756.1 Alternate UNSW_CanFamBas_1.0

      Range
      3816581..3828699 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038621702.1 → XP_038477630.1  akirin-1

      Conserved Domains (1) summary
      cd22243
      Location:2 → 192
      akirin-1

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049236.1 Alternate UU_Cfam_GSD_1.0

      Range
      3831983..3844112 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038557828.1 → XP_038413756.1  akirin-1

      UniProtKB/TrEMBL
      A0A8C0NRY3, A0A8C0Q2M1, A0A8I3Q8B1
      Conserved Domains (1) summary
      cd22243
      Location:2 → 192
      akirin-1

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006597.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      3997567..4009698 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038451708.1 → XP_038307636.1  akirin-1

      UniProtKB/TrEMBL
      A0A8C0NRY3, A0A8C0Q2M1, A0A8I3Q8B1
      Conserved Domains (1) summary
      cd22243
      Location:2 → 192
      akirin-1
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Miscellaneous