PPWD1 peptidylprolyl isomerase domain and WD repeat containing 1 [Bos taurus (cattle)] - Gene

Summary

Official Symbol: PPWD1provided by VGNC
Official Full Name: peptidylprolyl isomerase domain and WD repeat containing 1provided by VGNC
Primary source: VGNC:VGNC:33279
See related: BGD:BT29553; Ensembl:ENSBTAG00000009514
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Bos taurus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 20

Exon count:: 11

Annotation release	Status	Assembly	Chr	Location
RS_2023_09	current	ARS-UCD2.0 (GCF_002263795.3)	20	NC_037347.1 (13977037..13999109, complement)

Chromosome 20 - NC_037347.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_037347.1 Chromosome 20 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables peptidyl-prolyl cis-trans isomerase activity	IEA Inferred from Electronic Annotation more info	PubMed
enables protein binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in protein peptidyl-prolyl isomerization	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: peptidylprolyl isomerase domain and WD repeat-containing protein 1

NP_001039696.1

EC 5.2.1.8

XP_010815024.1

EC 5.2.1.8

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001046231.1 → NP_001039696.1 peptidylprolyl isomerase domain and WD repeat-containing protein 1

See identical proteins and their annotated locations for NP_001039696.1

Status: PROVISIONAL

Source sequence(s)

BC113320

UniProtKB/Swiss-Prot

Q29RZ2

UniProtKB/TrEMBL

A0A3Q1LV02

Related

ENSBTAP00000012520.3, ENSBTAT00000012520.4

Conserved Domains (4) summary

COG2319
Location:87 → 309

WD40; WD40 repeat [General function prediction only]

cd01927
Location:493 → 641

cyclophilin_WD40; cyclophilin_WD40: cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a WD40 domain. This group consists of several hypothetical and putative eukaryotic and bacterial proteins which have a cyclophilin domain and a WD40 domain. ...

sd00039
Location:134 → 175

7WD40; WD40 repeat [structural motif]

cl02567
Location:87 → 316

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

NC_037347.1 Reference ARS-UCD2.0 Primary Assembly

Range

13977037..13999109 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_010816722.1 → XP_010815024.1 peptidylprolyl isomerase domain and WD repeat-containing protein 1 isoform X1

See identical proteins and their annotated locations for XP_010815024.1

Conserved Domains (3) summary

cd01927
Location:362 → 510

cyclophilin_WD40; cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a WD40 domain. This group consists of several hypothetical and putative eukaryotic and bacterial proteins which have a cyclophilin domain and a WD40 domain. Function of the ...

sd00039
Location:94 → 145

7WD40; WD40 repeat [structural motif]

cl29593
Location:55 → 259

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...