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    nqo1 NAD(P)H dehydrogenase, quinone 1 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 549222, updated on 5-Mar-2024

    Summary

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    Official Symbol
    nqo1provided by Xenbase
    Official Full Name
    NAD(P)H dehydrogenase, quinone 1provided by Xenbase
    Primary source
    Xenbase:XB-GENE-955485
    See related
    Ensembl:ENSXETG00000017869
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 4 NC_030680.2 (60952112..60964327)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 4 NC_030680.1 (62379441..62391636, complement)

    Chromosome 4 - NC_030680.2Genomic Context describing neighboring genes Neighboring gene WW domain containing E3 ubiquitin protein ligase 2 Neighboring gene microRNA mir-140 Neighboring gene NIN1 (RPN12) binding protein 1 homolog Neighboring gene nuclear factor of activated T cells 5 Neighboring gene cytochrome b5 type B (outer mitochondrial membrane)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    NAD(P)H dehydrogenase [quinone] 1
    NP_001016468.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001016468.2 → NP_001016468.1  NAD(P)H dehydrogenase [quinone] 1

      See identical proteins and their annotated locations for NP_001016468.1

      Status: PROVISIONAL

      Source sequence(s)
      CR760928
      UniProtKB/TrEMBL
      A4QNN5, Q28HD6
      Related
      ENSXETP00000085021.2, ENSXETT00000103393.2
      Conserved Domains (1) summary
      pfam02525
      Location:8 → 215
      Flavodoxin_2; Flavodoxin-like fold

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      60952112..60964327
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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