SIGIRR single Ig and TIR domain containing [Gallus gallus (chicken)] - Gene

Summary

Symbol: SIGIRRprovided by CGNC
Full Name: single Ig and TIR domain containingprovided by CGNC
Primary source: CGNC:3137
See related: Ensembl:ENSGALG00010020734
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 5

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	5	NC_052536.1 (1736275..1741062)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	5	NC_052577.1 (1731094..1735881)

Chromosome 5 - NC_052536.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Few isoforms of chicken TIR8 were detected by Western blot, suggesting the occurrence of different post-translational processing in different organs.
Title: Expression of TIR8 receptor in chicken tissues.

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by RefSeq

Process	Evidence Code	Pubs
involved_in signal transduction	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: single Ig IL-1-related receptor

Names: single immunoglobulin and toll-interleukin 1 receptor (TIR) domain

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001199542.2 → NP_001186471.2 single Ig IL-1-related receptor

Status: PROVISIONAL

Source sequence(s)

JAENSK010000212

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Range

1736275..1741062

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_025150652.3 → XP_025006420.2 single Ig IL-1-related receptor isoform X1

Conserved Domains (1) summary

cl23749
Location:161 → 306

TIR_2; TIR domain
XM_025150655.3 → XP_025006423.2 single Ig IL-1-related receptor isoform X3

UniProtKB/TrEMBL

A0A8V0ZLV1

Related

ENSGALP00010029607.1, ENSGALT00010050106.1

Conserved Domains (1) summary

cl23749
Location:161 → 306

TIR_2; TIR domain
XM_015286201.4 → XP_015141687.2 single Ig IL-1-related receptor isoform X2

Conserved Domains (1) summary

cl23749
Location:160 → 305

TIR_2; TIR domain

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Range

1731094..1735881

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_046918070.1 → XP_046774026.1 single Ig IL-1-related receptor isoform X1
XM_046918072.1 → XP_046774028.1 single Ig IL-1-related receptor isoform X3

UniProtKB/TrEMBL

A0A8V0ZLV1
XM_046918071.1 → XP_046774027.1 single Ig IL-1-related receptor isoform X2