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    PTTG1IP2 PTTG1IP family member 2 [ Homo sapiens (human) ]

    Gene ID: 102723899, updated on 10-Mar-2024

    Summary

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    Official Symbol
    PTTG1IP2provided by HGNC
    Official Full Name
    PTTG1IP family member 2provided by HGNC
    Primary source
    HGNC:HGNC:55318
    See related
    Ensembl:ENSG00000251154 AllianceGenome:HGNC:55318
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Summary
    Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Broad expression in testis (RPKM 2.5), colon (RPKM 1.3) and 21 other tissues See more
    Orthologs
    mouse all
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    Genomic context

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    See PTTG1IP2 in Genome Data Viewer
    Location:
    7q21.13
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (90469639..90513397)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (91717921..91761664)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (90098953..90142711)

    Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene cell division cycle 42 pseudogene Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:90032955-90033480 Neighboring gene Sharpr-MPRA regulatory region 3343 Neighboring gene claudin 12 Neighboring gene Sharpr-MPRA regulatory region 14602 Neighboring gene uncharacterized LOC124901693 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr7:90208498-90209697 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18359 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18361 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18360 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18358 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26246 Neighboring gene small nucleolar RNA U13 Neighboring gene MPRA-validated peak6628 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26247 Neighboring gene cyclin dependent kinase 14 Neighboring gene TVP23C pseudogene 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    Genotypes

    General gene information

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    Homology

    Gene Ontology Provided by GOA

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    PTTG1IP family member 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001365443.2 → NP_001352372.1  PTTG1IP family member 2 precursor

      Status: VALIDATED

      Source sequence(s)
      AC002456
      Consensus CDS
      CCDS94140.1
      UniProtKB/Swiss-Prot
      P0DTF9
      Related
      ENSP00000504097.1, ENST00000509356.2

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

      Range
      90469639..90513397
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060931.1 Alternate T2T-CHM13v2.0

      Range
      91717921..91761664
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P0DTF9.1 GenPept UniProtKB/Swiss-Prot:P0DTF9

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials