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1700015F17Rik RIKEN cDNA 1700015F17 gene [ Mus musculus (house mouse) ]

Gene ID: 381716, updated on 31-Jan-2019

Summary

Official Symbol
1700015F17Rikprovided by MGI
Official Full Name
RIKEN cDNA 1700015F17 geneprovided by MGI
Primary source
MGI:MGI:2686532
See related
Ensembl:ENSMUSG00000079666
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm1686
Expression
Restricted expression toward testis adult (RPKM 84.4) See more
Orthologs

Genomic context

See 1700015F17Rik in Genome Data Viewer
Location:
5; 5 A1
Exon count:
7
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 5 NC_000071.6 (5437827..5479143, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (5437827..5479102, complement)

Chromosome 5 - NC_000071.6Genomic Context describing neighboring genes Neighboring gene cyclin-dependent kinase 14 Neighboring gene predicted gene, 30151 Neighboring gene predicted gene, 30267 Neighboring gene predicted gene, 30325 Neighboring gene claudin 12

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
protein import into nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
uncharacterized protein LOC381716

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001200025.1NP_001186954.1  uncharacterized protein LOC381716

    Status: VALIDATED

    Source sequence(s)
    AC068663, AK005993, AV044423
    Consensus CDS
    CCDS51410.1
    UniProtKB/TrEMBL
    D3YUK8
    Related
    ENSMUSP00000111107.1, ENSMUST00000115447.1

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000071.6 Reference GRCm38.p4 C57BL/6J

    Range
    5437827..5479143 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006503594.2XP_006503657.1  uncharacterized protein LOC381716 isoform X1

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