U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Pttg1ip2 PTTG1IP family member 2 [ Mus musculus (house mouse) ]

Gene ID: 381716, updated on 9-Dec-2024

Summary

Official Symbol
Pttg1ip2provided by MGI
Official Full Name
PTTG1IP family member 2provided by MGI
Primary source
MGI:MGI:2686532
See related
Ensembl:ENSMUSG00000079666 AllianceGenome:MGI:2686532
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm1686; 1700015F17Rik
Summary
Predicted to be involved in protein import into nucleus. Predicted to be located in membrane. Predicted to be active in cytoplasm and nucleus. Orthologous to human PTTG1IP2 (PTTG1IP family member 2). [provided by Alliance of Genome Resources, Dec 2024]
Expression
Restricted expression toward testis adult (RPKM 84.4) See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Pttg1ip2 in Genome Data Viewer
Location:
5 A1; 5 2.89 cM
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (5487827..5529143, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (5437827..5479143, complement)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene cyclin dependent kinase 14 Neighboring gene predicted gene, 54300 Neighboring gene STARR-seq mESC enhancer starr_12339 Neighboring gene STARR-seq mESC enhancer starr_12340 Neighboring gene STARR-seq mESC enhancer starr_12341 Neighboring gene predicted gene, 30151 Neighboring gene STARR-seq mESC enhancer starr_12342 Neighboring gene STARR-seq mESC enhancer starr_12343 Neighboring gene predicted gene, 30325 Neighboring gene claudin 12

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in protein import into nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001200025.1NP_001186954.1  PTTG1IP family member 2 precursor

    Status: VALIDATED

    Source sequence(s)
    AC068663, AK005993, AV044423
    Consensus CDS
    CCDS51410.1
    UniProtKB/Swiss-Prot
    D3YUK8
    Related
    ENSMUSP00000111107.2, ENSMUST00000115447.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    5487827..5529143 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006503594.4XP_006503657.1  PTTG1IP family member 2 isoform X1