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Pttg1ip2 PTTG1IP family member 2 [ Mus musculus (house mouse) ]

Gene ID: 381716, updated on 20-Feb-2021

Summary

Official Symbol
Pttg1ip2provided by MGI
Official Full Name
PTTG1IP family member 2provided by MGI
Primary source
MGI:MGI:2686532
See related
Ensembl:ENSMUSG00000079666
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm1686; 1700015F17Rik
Expression
Restricted expression toward testis adult (RPKM 84.4) See more
Orthologs
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Genomic context

See Pttg1ip2 in Genome Data Viewer
Location:
5; 5 A1
Exon count:
7
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (5487827..5529143, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (5437827..5479143, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (5437827..5479102, complement)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene cyclin-dependent kinase 14 Neighboring gene uncharacterized LOC118568748 Neighboring gene predicted gene, 30151 Neighboring gene predicted gene, 30325 Neighboring gene claudin 12

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
protein import into nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
PTTG1IP family member 2; uncharacterized protein LOC381716

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001200025.1NP_001186954.1  PTTG1IP family member 2 precursor

    Status: VALIDATED

    Source sequence(s)
    AC068663, AK005993, AV044423
    Consensus CDS
    CCDS51410.1
    UniProtKB/TrEMBL
    D3YUK8
    Related
    ENSMUSP00000111107.1, ENSMUST00000115447.1

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    5487827..5529143 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006503594.4XP_006503657.1  uncharacterized protein LOC381716 isoform X1

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