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    TMEM59 transmembrane protein 59 [ Bos taurus (cattle) ]

    Gene ID: 509775, updated on 5-Mar-2024

    Summary

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    Official Symbol
    TMEM59provided by VGNC
    Official Full Name
    transmembrane protein 59provided by VGNC
    Primary source
    VGNC:VGNC:36099
    See related
    BGD:BT14470; Ensembl:ENSBTAG00000009526
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See TMEM59 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (92177759..92203380)

    Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene CUB domain containing protein 2 Neighboring gene transcription elongation factor A N-terminal and central domain containing 2 Neighboring gene small nucleolar RNA SNORA42/SNORA80 family Neighboring gene low density lipoprotein receptor class A domain containing 1 Neighboring gene leucine rich repeat containing 42

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC127622

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in positive regulation of autophagy IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in late endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in lysosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transmembrane protein 59

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001035076.2 → NP_001030248.1  transmembrane protein 59 precursor

      See identical proteins and their annotated locations for NP_001030248.1

      Status: PROVISIONAL

      Source sequence(s)
      BC102302
      UniProtKB/TrEMBL
      A0A3Q1LSI0
      Conserved Domains (1) summary
      pfam12280
      Location:72 → 256
      BSMAP; Brain specific membrane anchored protein

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      92177759..92203380
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005204540.5 → XP_005204597.2  transmembrane protein 59 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1LSI0
      Related
      ENSBTAP00000012534.4, ENSBTAT00000012534.5
      Conserved Domains (1) summary
      pfam12280
      Location:83 → 268
      BSMAP; Brain specific membrane anchored protein

    2. XM_005204541.5 → XP_005204598.2  transmembrane protein 59 isoform X2

      UniProtKB/TrEMBL
      A0A3Q1LQR0, A0A3Q1LSI0
      Conserved Domains (1) summary
      pfam12280
      Location:83 → 267
      BSMAP; Brain specific membrane anchored protein

    3. XM_005204542.4 → XP_005204599.1  transmembrane protein 59 isoform X3

      UniProtKB/TrEMBL
      A0A3Q1LSI0
      Conserved Domains (1) summary
      pfam12280
      Location:72 → 257
      BSMAP; Brain specific membrane anchored protein
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3T0Q2.2 GenPept UniProtKB/Swiss-Prot:Q3T0Q2

    Gene LinkOut

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