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    LZTR1 leucine zipper like transcription regulator 1 [ Bos taurus (cattle) ]

    Gene ID: 506776, updated on 6-Jun-2024

    Summary

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    Official Symbol
    LZTR1provided by VGNC
    Official Full Name
    leucine zipper like transcription regulator 1provided by VGNC
    Primary source
    VGNC:VGNC:31120
    See related
    BGD:BT28465; Ensembl:ENSBTAG00000011292
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See LZTR1 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 17 NC_037344.1 (72326813..72339649)

    Chromosome 17 - NC_037344.1Genomic Context describing neighboring genes Neighboring gene CRK like proto-oncogene, adaptor protein Neighboring gene apoptosis inducing factor mitochondria associated 3 Neighboring gene THAP domain containing 7 Neighboring gene tubulin, alpha 3e

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037344.1 Chromosome 17 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    leucine-zipper-like transcriptional regulator 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001192111.1 → NP_001179040.1  leucine-zipper-like transcriptional regulator 1

      Status: PROVISIONAL

      Source sequence(s)
      AAFC03118597, AAFC03129502
      UniProtKB/TrEMBL
      E1BLW3
      Related
      ENSBTAP00000015001.7, ENSBTAT00000015001.7
      Conserved Domains (8) summary
      PLN02153
      Location:112 → 417
      PLN02153; epithiospecifier protein
      smart00225
      Location:668 → 765
      BTB; Broad-Complex, Tramtrack and Bric a brac
      cd14821
      Location:574 → 634
      SPOP_C_like; BACK-like Domain C-terminal to BTB in speckle-type POZ protein (SPOP) and similar proteins
      sd00038
      Location:68 → 114
      Kelch; KELCH repeat [structural motif]
      pfam00651
      Location:665 → 764
      BTB; BTB/POZ domain
      pfam01344
      Location:283 → 326
      Kelch_1; Kelch motif
      pfam13415
      Location:77 → 126
      Kelch_3; Galactose oxidase, central domain
      pfam13418
      Location:174 → 220
      Kelch_4; Galactose oxidase, central domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037344.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      72326813..72339649
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059875913.1 → XP_059731896.1  leucine-zipper-like transcriptional regulator 1 isoform X3

      UniProtKB/TrEMBL
      E1BLW3

    2. XM_059875914.1 → XP_059731897.1  leucine-zipper-like transcriptional regulator 1 isoform X3

      UniProtKB/TrEMBL
      E1BLW3

    3. XM_059875912.1 → XP_059731895.1  leucine-zipper-like transcriptional regulator 1 isoform X1

      UniProtKB/TrEMBL
      E1BLW3

    4. XM_024977095.2 → XP_024832863.1  leucine-zipper-like transcriptional regulator 1 isoform X2

      UniProtKB/TrEMBL
      E1BLW3
      Conserved Domains (5) summary
      cd14821
      Location:569 → 629
      SPOP_C_like; BACK-like Domain C-terminal to BTB in speckle-type POZ protein (SPOP) and similar proteins
      sd00038
      Location:68 → 114
      Kelch; KELCH repeat [structural motif]
      pfam00651
      Location:660 → 748
      BTB; BTB/POZ domain
      pfam03089
      Location:367 → 420
      RAG2; Recombination activating protein 2
      cl26061
      Location:68 → 338
      PLN02193; nitrile-specifier protein
    Nucleotide Protein Strain
    Heading Accession and Version

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