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    CYCSP28 CYCS pseudogene 28 [ Homo sapiens (human) ]

    Gene ID: 360179, updated on 10-Oct-2023

    Summary

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    Official Symbol
    CYCSP28provided by HGNC
    Official Full Name
    CYCS pseudogene 28provided by HGNC
    Primary source
    HGNC:HGNC:24402
    See related
    AllianceGenome:HGNC:24402
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    HCP28
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    Genomic context

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    See CYCSP28 in Genome Data Viewer
    Location:
    11q14.1
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (83328858..83329445)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (83265288..83265875)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (83039901..83040488)

    Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:82996183-82996779 Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:82996780-82997375 Neighboring gene uncharacterized LOC105369420 Neighboring gene CCDC90B antisense RNA 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:83036792-83037292 Neighboring gene coiled-coil domain containing 90B Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:83149453-83149953 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr11:83152064-83152757 Neighboring gene uncharacterized LOC107984425 Neighboring gene DLG2 intron CAGE-defined low expression enhancer Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:83298443-83299026 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:83299027-83299610 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5354 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3821 Neighboring gene discs large MAGUK scaffold protein 2 Neighboring gene DLG2 antisense RNA 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The human genome has 49 cytochrome c pseudogenes, including a relic of a primordial gene that still functions in mouse. Zhang Z, et al. Gene, 2003 Jul 17. PMID 12909341

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Other Names

    • cytochrome c, somatic pseudogene 28

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_002978.3 

      Range
      101..688
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      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

      Range
      83328858..83329445
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060935.1 Alternate T2T-CHM13v2.0

      Range
      83265288..83265875
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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