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    fbp1a fructose-1,6-bisphosphatase 1a [ Salmo salar (Atlantic salmon) ]

    Gene ID: 106593443, updated on 3-Apr-2024

    Summary

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    Gene symbol
    fbp1a
    Gene description
    fructose-1,6-bisphosphatase 1a
    See related
    Ensembl:ENSSSAG00000095867
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Salmo salar
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
    Also known as
    f16p1
    Orthologs
    zebrafish all
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    Genomic context

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    See fbp1a in Genome Data Viewer
    Location:
    chromosome: ssa15
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    102 current Ssal_v3.1 (GCF_905237065.1) ssa15 NC_059456.1 (11418030..11433714, complement)
    100 previous assembly ICSASG_v2 (GCF_000233375.1) Unplaced Scaffold NW_012350172.1 (221..10163, complement)

    Chromosome ssa15 - NC_059456.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106570974 Neighboring gene growth arrest-specific 1a Neighboring gene death-associated protein kinase 1 Neighboring gene extensin-like Neighboring gene KN motif and ankyrin repeat domains 1a Neighboring gene doublesex and mab-3 related transcription factor 3a

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A de novo Full-Length mRNA Transcriptome Generated From Hybrid-Corrected PacBio Long-Reads Improves the Transcript Annotation and Identifies Thousands of Novel Splice Variants in Atlantic Salmon. Ramberg S, et al. Front Genet, 2021. PMID 33986770, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables fructose 1,6-bisphosphate 1-phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in fructose 1,6-bisphosphate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in fructose 6-phosphate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in fructose metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in gluconeogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sucrose biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: fructose-1,6-bisphosphatase 1a
    Names
    fructose-1,6-bisphosphatase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Ssal_v3.1

    Genomic

    1. NC_059456.1 Reference Ssal_v3.1

      Range
      11418030..11433714 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_045695462.1 → XP_045551418.1  LOW QUALITY PROTEIN: fructose-1,6-bisphosphatase 1a

      UniProtKB/TrEMBL
      A0A1S3QJS8
      Related
      ENSSSAP00000150732.1, ENSSSAT00000235756.1
      Conserved Domains (1) summary
      cd00354
      Location:18 → 332
      FBPase; Fructose-1,6-bisphosphatase, an enzyme that catalyzes the hydrolysis of fructose-1,6-biphosphate into fructose-6-phosphate and is critical in gluconeogenesis pathway. The alignment model also includes chloroplastic FBPases and sedoheptulose-1, ...
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases