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Submitted SNP(ss) Details: ss454761663           
Submitter
Handle1000GENOMES
Submitter SNP ID20101123_snps_928893_chr1_237855686
RefSNP(rs#)rs189875178
Submitted Batch IDphase_1_vqsr_v2b_sites_june_2011
Submitted DateJul 20, 2011
Publication CitedN.D.
First entry to dbSNPJul 20 2011 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodLOW_COVERAGE
Ascertainment Samplesize2188
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss454761663|allelePos=201|len=401|taxid=9606|alleles='G/A'|mol=Genomic
 ATTTTATGCA TTCATTCAAT AAACATGTAT TGTATGTCTG CCACGTGAAA GGCATTCACT
 CAAGATGTGA GGATAGGAAA ATGAAGATTG ATTTCTCTTT CCACTCCGGA ACCCAGACCA
 ATATGCAAAC ATCTTTCGCT TGTACTATTG CAGGAGCATA CTGACCATTC TCTCTGAATC
 CCCTCCTGCT TCTCTCAACT
 R
 TGTTCCACGA TGATCTTATC AAATCTTCTC AAAACACACT TCTCTGATTA CACTCCTGCA
 TATTCAGTGG CTTCCCATGC CTTTAGGGTA GAAAGCACGT TTCTTAACCT AGCCACATTA
 GTGTTTCACC GTCCATTCCC CATGGGCCAC TCCGTCCTCG TGTCCCAGCC CAGTCTCTCC
 TCCTCCCTAT GCTTCTTCAG

  Submitted Frequency for ss454761663 back to top
There is no frequency submission for ss454761663.


  dbSNP summary of Genotypes for ss454761663 back to top
No sufficient data to compute Hardy-weinberg probability for ss454761663.


  Submitted individual genotype for ss454761663 back to top
There is no individual genotype data for ss454761663.

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