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BUILD 130
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dbSNP Summary
RELEASE: NCBI dbSNP Build 130

dbSNP Component Availability Dates:

Component Date available
dbSNP web query for build 130: Apr 30, 2009
ftp data for build 130: May 03, 2009
Entrez Indexing for build 130: May 03, 2009
BLAST database for build 130: May 03, 2009

-  The complete data for build 130 are available at ftp://ftp.ncbi.nih.gov/snp/ in multiple formats.
-  All formats and conventions are described in ftp://ftp.ncbi.nih.gov/snp/00readme.txt.

-  Please address any questions or comments regarding the data to snp-admin@ncbi.nlm.nih.gov.

New Submission since previous build:
Organism Current
Build
New Submissions
(ss#'s)
New RefSNP Clusters
(rs#'s) ( # validated)
New ss# with
Genotype
New ss# with
Frequency
Homo sapiens 13012,878,918 3 (0) 368
Mus musculus 1288,007,812 (0)
Gallus gallus 1281 (0)
Bos taurus 1302,444,367 (0) 38
Anopheles gambiae 1283 (0)
Sus scrofa 128373,404 (0)
Plasmodium falciparum 12768,710 (0)
Oncorhynchus mykiss 128183 (0)
Oncorhynchus tshawytscha 12618 (0)
Mus spretus 1264 (0) 4
Total: 10 Organisms 23,773,420 3 () 410


*Submissions received after reclustering of current build will appear as new rs# clusters in the next build.

BUILD STATISTICS:
Organism dbSNP
Build
Genome
Build
Number of
Submissions
(ss#'s)
Number of
RefSNP Clusters
(rs#'s) ( # validated)
Number of
(rs#'s)
in gene
Number of
(ss#'s)
with
genotype
Number of
(ss#'s)
with
frequency
Homo sapiens 130 36.392,364,155 17,804,036 (9,468,384) 7,344,853 803,969
Mus musculus 128 37.126,675,134 14,380,528 (6,447,366) 5,878,592
Oryza sativa 128 4.15,872,306 5,418,373 (22,057) 1,897,895
Rattus norvegicus 130 4.12,755,176 2,743,905 (1,605) 1,024,738
Gallus gallus 128 2.13,641,966 3,293,383 (3,280,002) 1,452,147
Bos taurus 130 4.14,929,649 2,210,483 (13,881) 677,906 407
Canis familiaris 126 2.13,527,071 3,301,322 (217,525) 982,946 17
Ornithorhynchus anatinus 130 1.11,883,034 1,319,269 (0) 335,055
Equus caballus 130 2.11,163,580 1,163,580 (0) 382,835 9
Pan troglodytes 127 2.11,544,900 1,543,208 (112,654) 527,665 2
Danio rerio 130 3.1700,855 662,322 (4,719) 398,819
Monodelphis domestica 128 2.11,196,103 1,194,131 (0) 287,496
Anopheles gambiae 128 2.21,375,834 1,131,534 (0)
Apis mellifera 128 4.11,118,192 1,117,049 (16) 69,462
Sus scrofa 128 1.1541,144 8,427 (24) 139
Felis catus 127 1.1327,037 327,037 (0)
Plasmodium falciparum 127 253,781 185,071 (47)
Saccharum hybrid cultivar 126 42,853 42,853 (0)
Caenorhabditis briggsae 129 34,403 (0)
Drosophila melanogaster 128 8.327,377 11 (0)
Glycine max 127 18,873 278 (234)
Fusarium graminearum 129 10,493 (0)
Zea mays 128 4,932 4,932 (80)
Ovis aries 128 4,629 4,181 (66) 59
Bos indicus x Bos taurus 128 3.12,445 2,486 (42) 137 2
Macaca mulatta 128 1.11,237 780 (519) 601 1,148
Caenorhabditis elegans 128 7.11,065 1,065 (0)
Salmo salar 128 1,172 755 (0) 10
Arabidopsis thaliana 130 7.1301 301 (184)
Oncorhynchus mykiss 128 632 400 (0) 304
Pinus pinaster 126 1,439 32 (0)
Cooperia oncophora 126 426 426 (96) 425
Vitis vinifera 129 1,029 (0) 88
Oncorhynchus tshawytscha 126 699 (0) 52
Macaca fascicularis 128 1.1153 114 (0) 153
Solanum lycopersicum 129 404 (0)
Anopheles funestus 126 354 (0)
Heterodera glycines 129 248 (0)
Oncorhynchus keta 127 212 (0)
Ficedula albicollis 126 83 37 (15) 37
Oncorhynchus nerka 127 118 (0)
Allium cepa 127 45 50 (0)
Ficedula hypoleuca 126 28 20 (10) 28
Zostera marina 129 51 (0)
Agelaius phoeniceus 126 47 (0)
Oncorhynchus kisutch 127 40 (0)
Capra hircus 129 28 (0)
Medicago truncatula 129 27 (0)
Oreochromis niloticus 127 26 (0)
Bison bison 128 3.16 6 (2) 2 6
Mus spretus 126 4 (0) 4
Hydroides elegans 126 8 7 (1)
Schistosoma mansoni 127 8 (0) 2
Gorilla gorilla 127 2 (0)
Staphylococcus aureus 129 1 (0)
Total: 55 Organisms 5
genomes
156,528,761 63,751,769 (19,576,037) 23,402,596 806,870



See summary for past builds:

for dbSNP build:

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
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SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
HAPLOTYPE:Submission | Specifications | Sample HapSet | Sample Individual
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

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Revised: May 25, 2006 1:38 PM .