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Submitted SNP(ss) Details: ss109897585           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_1486174_chr6_31448470
RefSNP(rs#)rs2523520
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 16 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:136

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss109897585|allelePos=201|len=401|taxid=9606|alleles='A/G'|mol=Genomic
 AGAAAGAGTA TTTGAAGAAA TAATGACCCC AAACTTCTGA AATTTTTTTG AAAACATGAA
 TCTGGGTATC CAAAACACTC AAACATTTAA AGTAGCAGTA ATTCAAAGAT GTCCACACTG
 ACAGACATTA TATTGAAACT GTCGAAAGTC AAAGACAAAC AGAGCATCTT GAAAACAACA
 AGAGAAGGGA CTCATTGGGT
 R
 CAAGGATCCT CCATGAGATT AACTGCCAAG TGTTCTTCAG AAACCATGGA GTTCAGAAGA
 CATTGGCCTG ACAAACTTAA AGTTCAGAAA GAAAAAAAAA CCTGTCTCAA CTGACAGTTG
 CATATTTGAC AAAACTCTCC ATGAGAAATA ATGGAGAAAT TCAGACATGC ACAGGTAAAT
 AAAAGCTGAT GGCATTCGTC

  Submitted Frequency for ss109897585 back to top
There is no frequency submission for ss109897585.


  dbSNP summary of Genotypes for ss109897585 back to top
No sufficient data to compute Hardy-weinberg probability for ss109897585.


  Submitted individual genotype for ss109897585 back to top
There is no individual genotype data for ss109897585.

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