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    CC1G_04002 hypothetical protein [ Coprinopsis cinerea okayama7#130 ]

    Gene ID: 6007572, updated on 17-May-2024

    Summary

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    Gene symbol
    CC1G_04002
    Gene description
    hypothetical protein
    Primary source
    FungiDB:CC1G_04002
    Locus tag
    CC1G_04002
    Gene type
    protein coding
    RNA name
    hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Coprinopsis cinerea okayama7#130 (strain: okayama7#130)
    Lineage
    Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Psathyrellaceae; Coprinopsis
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    Genomic context

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    Location:
    chromosome: 7, map: unlocalized
    Exon count:
    14

    NW_003307538.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003307538.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus). Stajich JE, et al. Proc Natl Acad Sci U S A, 2010 Jun 29. PMID 20547848, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_003307538.1 Reference assembly

      Range
      630976..636624
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001831059.2 → XP_001831111.2  hypothetical protein CC1G_04002 [Coprinopsis cinerea okayama7#130]

      See identical proteins and their annotated locations for XP_001831111.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A8N8F5
      Conserved Domains (8) summary
      smart00225
      Location:927 → 1042
      BTB; Broad-Complex, Tramtrack and Bric a brac
      cd00204
      Location:151 → 237
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam00415
      Location:373 → 423
      RCC1; Regulator of chromosome condensation (RCC1) repeat
      pfam13540
      Location:357 → 386
      RCC1_2; Regulator of chromosome condensation (RCC1) repeat
      pfam13637
      Location:160 → 216
      Ank_4; Ankyrin repeats (many copies)
      pfam15327
      Location:1143 → 1278
      Tankyrase_bdg_C; Tankyrase binding protein C terminal domain
      sd00045
      Location:159 → 192
      ANK; ANK repeat [structural motif]
      cl02518
      Location:927 → 1039
      BTB; BTB/POZ domain
    Nucleotide Protein
    Heading Accession and Version

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