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    NR1I3 nuclear receptor subfamily 1 group I member 3 [ Bos taurus (cattle) ]

    Gene ID: 493711, updated on 3-Apr-2024

    Summary

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    Official Symbol
    NR1I3provided by VGNC
    Official Full Name
    nuclear receptor subfamily 1 group I member 3provided by VGNC
    Primary source
    VGNC:VGNC:32234
    See related
    BGD:BT15079; Ensembl:ENSBTAG00000009215
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (8271741..8276670)

    Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene myelin protein zero Neighboring gene Purkinje cell protein 4 like 1 Neighboring gene translocase of outer mitochondrial membrane 40 like Neighboring gene apolipoprotein A2 Neighboring gene Fc epsilon receptor Ig

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nuclear receptor subfamily 1 group I member 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001079768.2 → NP_001073236.1  nuclear receptor subfamily 1 group I member 3

      See identical proteins and their annotated locations for NP_001073236.1

      Status: PROVISIONAL

      Source sequence(s)
      BC112658
      UniProtKB/TrEMBL
      A0A3S5ZPB3, F1MEX0, Q2KIF4
      Related
      ENSBTAP00000012145.5, ENSBTAT00000012145.6
      Conserved Domains (2) summary
      cd07156
      Location:11 → 82
      NR_DBD_VDR_like; The DNA-binding domain of vitamin D receptors (VDR) like nuclear receptor family is composed of two C4-type zinc fingers
      cl11397
      Location:106 → 346
      NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      8271741..8276670
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010802741.4 → XP_010801043.1  nuclear receptor subfamily 1 group I member 3 isoform X2

      See identical proteins and their annotated locations for XP_010801043.1

      UniProtKB/TrEMBL
      A0A3S5ZPB3, F1MEX0, Q2KIF4
      Related
      ENSBTAP00000094330.1, ENSBTAT00000120283.1
      Conserved Domains (2) summary
      cd07156
      Location:11 → 82
      NR_DBD_VDR_like; The DNA-binding domain of vitamin D receptors (VDR) like nuclear receptor family is composed of two C4-type zinc fingers
      cl11397
      Location:106 → 346
      NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators

    2. XM_059882105.1 → XP_059738088.1  nuclear receptor subfamily 1 group I member 3 isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version

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