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    RASD2 RASD family member 2 [ Homo sapiens (human) ]

    Gene ID: 23551, updated on 5-Mar-2024

    Summary

    Official Symbol
    RASD2provided by HGNC
    Official Full Name
    RASD family member 2provided by HGNC
    Primary source
    HGNC:HGNC:18229
    See related
    Ensembl:ENSG00000100302 MIM:612842; AllianceGenome:HGNC:18229
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    Rhes; TEM2
    Summary
    This gene belongs to the Ras superfamily of small GTPases and is enriched in the striatum. The encoded protein functions as an E3 ligase for attachment of small ubiquitin-like modifier (SUMO). This protein also binds to mutant huntingtin (mHtt), the protein mutated in Huntington disease (HD). Sumoylation of mHTT by this protein may cause degeneration of the striatum. The protein functions as an activator of mechanistic target of rapamycin 1 (mTOR1), which in turn plays a role in myelination, axon growth and regeneration. Reduced levels of mRNA expressed by this gene were found in HD patients. [provided by RefSeq, Jan 2016]
    Expression
    Broad expression in prostate (RPKM 3.2), brain (RPKM 2.7) and 18 other tissues See more
    Orthologs
    NEW
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    Genomic context

    Location:
    22q12.3
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (35532806..35553999)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (35991542..36012893)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (35928853..35950046)

    Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18906 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18907 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18908 Neighboring gene minichromosome maintenance complex component 5 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:35821835-35822340 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:35822341-35822848 Neighboring gene H3K27ac hESC enhancer GRCh37_chr22:35822849-35823354 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:35831135-35831636 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18909 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:35844065-35845031 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:35845032-35845997 Neighboring gene ReSE screen-validated silencer GRCh37_chr22:35874918-35875095 Neighboring gene tRNA methyltransferase subunit 11-2 pseudogene 8 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:35935540-35936102 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:35936103-35936665 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:35936666-35937228 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:35945090-35945800 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:35948337-35949316 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:35957537-35958268 Neighboring gene uncharacterized LOC107985590 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18910 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:35976583-35977082 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:35979057-35979558 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:35985272-35986247 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:35987987-35988548 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:35994347-35995088 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:36001614-36002114 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13659 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:36018115-36018630 Neighboring gene Sharpr-MPRA regulatory region 11360 Neighboring gene myoglobin

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables G-protein beta-subunit binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables G-protein beta-subunit binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables GTPase activity NAS
    Non-traceable Author Statement
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in locomotory behavior ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of protein sumoylation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in regulation of cAMP-mediated signaling ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in synaptic transmission, dopaminergic IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in synapse IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    GTP-binding protein Rhes
    Names
    Ras homolog enriched in striatum
    tumor endothelial marker 2
    NP_001353654.1
    NP_001363444.1
    NP_001363445.1
    NP_055125.2
    XP_011528342.1
    XP_016884191.1
    XP_054181372.1
    XP_054181373.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001366725.1NP_001353654.1  GTP-binding protein Rhes precursor

      Status: REVIEWED

      Source sequence(s)
      AL022334
      Consensus CDS
      CCDS13916.1
      UniProtKB/Swiss-Prot
      O95520, Q5THY8, Q96D21
      Conserved Domains (1) summary
      cd04143
      Location:20266
      Rhes_like; Ras homolog enriched in striatum (Rhes) and activator of G-protein signaling 1 (Dexras1/AGS1)
    2. NM_001376515.1NP_001363444.1  GTP-binding protein Rhes precursor

      Status: REVIEWED

      Source sequence(s)
      AL022334
      Consensus CDS
      CCDS13916.1
      UniProtKB/Swiss-Prot
      O95520, Q5THY8, Q96D21
      Conserved Domains (1) summary
      cd04143
      Location:20266
      Rhes_like; Ras homolog enriched in striatum (Rhes) and activator of G-protein signaling 1 (Dexras1/AGS1)
    3. NM_001376516.1NP_001363445.1  GTP-binding protein Rhes precursor

      Status: REVIEWED

      Source sequence(s)
      AL022334
      Consensus CDS
      CCDS13916.1
      UniProtKB/Swiss-Prot
      O95520, Q5THY8, Q96D21
      Conserved Domains (1) summary
      cd04143
      Location:20266
      Rhes_like; Ras homolog enriched in striatum (Rhes) and activator of G-protein signaling 1 (Dexras1/AGS1)
    4. NM_014310.4NP_055125.2  GTP-binding protein Rhes precursor

      See identical proteins and their annotated locations for NP_055125.2

      Status: REVIEWED

      Source sequence(s)
      AL022334, BC013419
      Consensus CDS
      CCDS13916.1
      UniProtKB/Swiss-Prot
      O95520, Q5THY8, Q96D21
      Related
      ENSP00000216127.4, ENST00000216127.5
      Conserved Domains (1) summary
      cd04143
      Location:20266
      Rhes_like; Ras homolog enriched in striatum (Rhes) and activator of G-protein signaling 1 (Dexras1/AGS1)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

      Range
      35532806..35553999
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017028702.2XP_016884191.1  GTP-binding protein Rhes isoform X1

      UniProtKB/Swiss-Prot
      O95520, Q5THY8, Q96D21
      Conserved Domains (1) summary
      cd04143
      Location:20266
      Rhes_like; Ras homolog enriched in striatum (Rhes) and activator of G-protein signaling 1 (Dexras1/AGS1)
    2. XM_011530040.3XP_011528342.1  GTP-binding protein Rhes isoform X1

      See identical proteins and their annotated locations for XP_011528342.1

      UniProtKB/Swiss-Prot
      O95520, Q5THY8, Q96D21
      Conserved Domains (1) summary
      cd04143
      Location:20266
      Rhes_like; Ras homolog enriched in striatum (Rhes) and activator of G-protein signaling 1 (Dexras1/AGS1)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060946.1 Alternate T2T-CHM13v2.0

      Range
      35991542..36012893
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054325397.1XP_054181372.1  GTP-binding protein Rhes isoform X1

      UniProtKB/Swiss-Prot
      O95520, Q5THY8, Q96D21
    2. XM_054325398.1XP_054181373.1  GTP-binding protein Rhes isoform X1

      UniProtKB/Swiss-Prot
      O95520, Q5THY8, Q96D21