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MCYG_06556 glycerophosphodiesterase GDE1 [ Microsporum canis CBS 113480 ]

Gene ID: 9222367, updated on 17-May-2024

Summary

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Gene symbol
MCYG_06556
Gene description
glycerophosphodiesterase GDE1
Primary source
FungiDB:MCYG_06556
Locus tag
MCYG_06556
See related
VEuPathDB:MCYG_06556
Gene type
protein coding
RNA name
glycerophosphodiesterase GDE1
RefSeq status
PROVISIONAL
Organism
Microsporum canis CBS 113480 (strain: CBS 113480)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Arthrodermataceae; Microsporum
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Genomic context

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See MCYG_06556 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
7

NW_003299164.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene TPR Domain containing protein Neighboring gene pathway-specific nitrogen regulator

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003299164.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycerophosphocholine phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycerophospholipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycerophosphodiesterase GDE1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003299164.1 Reference assembly

    Range
    1182982..1186565 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002844546.1 → XP_002844592.1  glycerophosphodiesterase GDE1 [Microsporum canis CBS 113480]

    See identical proteins and their annotated locations for XP_002844592.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C5FV03
    Conserved Domains (6) summary
    cd00204
    Location:370 → 501
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd14447
    Location:2 → 129
    SPX; Domain found in Syg1, Pho81, XPR1, and related proteins
    pfam03009
    Location:728 → 1027
    GDPD; Glycerophosphoryl diester phosphodiesterase family
    pfam12796
    Location:414 → 511
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:442 → 477
    ANK; ANK repeat [structural motif]
    cl14615
    Location:722 → 1034
    PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily
Protein Accession Links
GenPept Link UniProtKB Link
EEQ33737.1

Gene LinkOut

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Molecular Biology Databases
Research Materials