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DDB_G0287729 hypothetical protein [ Dictyostelium discoideum AX4 ]

Gene ID: 8626268, updated on 17-May-2024

Summary

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Gene symbol
DDB_G0287729
Gene description
hypothetical protein
Primary source
dictyBase:DDB_G0287729
Locus tag
DDB_G0287729
See related
AmoebaDB:DDB_G0287729; VEuPathDB:DDB_G0287729
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Dictyostelium discoideum AX4 (strain: AX4)
Lineage
Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium
Old locus tag
DDBDRAFT_0187596; DDB_0187596
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Genomic context

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Location:
chromosome: 5
Exon count:
4
Sequence:
Chromosome: 5; NC_007091.3 (613467..615948)

Chromosome 5 - NC_007091.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene syntaxin 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007091.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the social amoeba Dictyostelium discoideum. Eichinger L, et al. Nature, 2005 May 5. PMID 15875012, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by dictyBase

Function Evidence Code Pubs
enables acyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables palmitoyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein-cysteine S-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in protein palmitoylation IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in Golgi membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Names
hypothetical protein
XP_637013.1
  • Ankyrin repeat-containing protein AKR1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007091.3 Reference assembly

    Range
    613467..615948
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_631921.1 → XP_637013.1  hypothetical protein DDB_G0287729 [Dictyostelium discoideum AX4]

    See identical proteins and their annotated locations for XP_637013.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q54JY9
    Conserved Domains (6) summary
    COG0666
    Location:80 → 228
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    cd00204
    Location:141 → 301
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam01529
    Location:493 → 624
    zf-DHHC; DHHC palmitoyltransferase
    pfam12796
    Location:151 → 279
    Ank_2; Ankyrin repeats (3 copies)
    pfam13857
    Location:267 → 322
    Ank_5; Ankyrin repeats (many copies)
    sd00045
    Location:146 → 177
    ANK; ANK repeat [structural motif]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q54JY9.1

Gene LinkOut

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Molecular Biology Databases
Research Materials