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TSTA_116020 RNA binding protein (Arp), putative [ Talaromyces stipitatus ATCC 10500 ]

Gene ID: 8099629, updated on 17-May-2024

Summary

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Gene symbol
TSTA_116020
Gene description
RNA binding protein (Arp), putative
Primary source
FungiDB:TSTA_116020
Locus tag
TSTA_116020
See related
VEuPathDB:TSTA_116020
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Talaromyces stipitatus ATCC 10500 (strain: ATCC 10500, culture-collection: ATCC:10500, type-material: type material of Talaromyces stipitatus)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Trichocomaceae; Talaromyces; Talaromyces sect. Talaromyces
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Genomic context

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See TSTA_116020 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
4

NW_002990116.1Genomic Context describing neighboring genes Neighboring gene sulfite oxidase, putative Neighboring gene cysteine synthase (o-acetylserine (thiol)-lyase) (csase) Neighboring gene nuclear condensin complex subunit 3, putative Neighboring gene proteasome component Pre6, putative Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_002990116.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-5'-RNA exonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA binding protein (Arp), putative
XP_002481802.1
  • encoded by transcript TSTA_116020A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_002990116.1 Reference assembly

    Range
    1354328..1356490 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002481757.1 → XP_002481802.1  RNA binding protein (Arp), putative [Talaromyces stipitatus ATCC 10500]

    See identical proteins and their annotated locations for XP_002481802.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8MBE6
    Conserved Domains (5) summary
    cd06133
    Location:14 → 218
    ERI-1_3'hExo_like; DEDDh 3'-5' exonuclease domain of Caenorhabditis elegans ERI-1, human 3' exonuclease, and similar proteins
    COG0724
    Location:214 → 354
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12452
    Location:253 → 335
    RRM_ARP_like; RNA recognition motif in yeast asparagine-rich protein (ARP) and similar proteins
    sd00025
    Location:356 → 375
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam00641
    Location:352 → 379
    zf-RanBP; Zn-finger in Ran binding protein and others
Nucleotide Protein
Heading Accession and Version

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