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NKX2-4 NK2 homeobox 4 [ Bos taurus (cattle) ]

Gene ID: 787396, updated on 5-Mar-2024

Summary

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Official Symbol
NKX2-4provided by VGNC
Official Full Name
NK2 homeobox 4provided by VGNC
Primary source
VGNC:VGNC:32101
See related
BGD:BT14129; Ensembl:ENSBTAG00000011312
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See NKX2-4 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 13 NC_037340.1 (40683515..40685771, complement)

Chromosome 13 - NC_037340.1Genomic Context describing neighboring genes Neighboring gene S-phase kinase-associated protein 2-like Neighboring gene 5'-3' exoribonuclease 2 Neighboring gene uncharacterized LOC112449289 Neighboring gene NK2 homeobox 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037340.1 Chromosome 13 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NK2 homeobox 1a; homeobox protein Nkx-2.4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037340.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    40683515..40685771 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002707723.6 → XP_002707769.3  homeobox protein Nkx-2.4

    UniProtKB/TrEMBL
    F1MKX5
    Related
    ENSBTAP00000015024.6, ENSBTAT00000015024.7
    Conserved Domains (1) summary
    pfam00046
    Location:193 → 242
    Homeobox; Homeobox domain
Nucleotide Protein Strain
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Gene LinkOut

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Molecular Biology Databases
Research Materials