gpm6a glycoprotein M6A [Xenopus tropicalis (tropical clawed frog)] - Gene

Summary

Official Symbol: gpm6aprovided by Xenbase
Official Full Name: glycoprotein M6Aprovided by Xenbase
Primary source: Xenbase:XB-GENE-1000183
See related: Ensembl:ENSXETG00000036810
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus tropicalis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 1

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
104	current	UCB_Xtro_10.0 (GCF_000004195.4)	1	NC_030677.2 (47938911..48020176)
103	previous assembly	Xenopus_tropicalis_v9.1 (GCF_000004195.3)	1	NC_030677.1 (38693328..38770325)

Chromosome 1 - NC_030677.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by Xenbase

Process	Evidence Code	Pubs
involved_in neuron projection development	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in axonal growth cone	IBA Inferred from Biological aspect of Ancestor more info
located_in dendritic spine	IEA Inferred from Electronic Annotation more info
is_active_in filopodium	IBA Inferred from Biological aspect of Ancestor more info
located_in filopodium	IEA Inferred from Electronic Annotation more info
located_in membrane	IEA Inferred from Electronic Annotation more info
is_active_in neuronal cell body	IBA Inferred from Biological aspect of Ancestor more info
is_active_in plasma membrane	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: neuronal membrane glycoprotein M6-a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001079383.1 → NP_001072851.1 neuronal membrane glycoprotein M6-a

See identical proteins and their annotated locations for NP_001072851.1

Status: PROVISIONAL

Source sequence(s)

BC122913

UniProtKB/TrEMBL

A0A6I8RH28, Q0IHY2

Conserved Domains (1) summary

pfam01275
Location:14 → 247

Myelin_PLP; Myelin proteolipid protein (PLP or lipophilin)

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

Range

47938911..48020176

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_031902348.1 → XP_031758208.1 neuronal membrane glycoprotein M6-a isoform X1

UniProtKB/TrEMBL

A0A6I8RH28, Q0IHY2

Related

ENSXETP00000115646.1, ENSXETT00000123490.1

Conserved Domains (1) summary

pfam01275
Location:14 → 247

Myelin_PLP; Myelin proteolipid protein (PLP or lipophilin)