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entrep2 endosomal transmembrane epsin interactor 2 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 779825, updated on 17-Aug-2024

Summary

Official Symbol
entrep2provided by Xenbase
Official Full Name
endosomal transmembrane epsin interactor 2provided by Xenbase
Primary source
Xenbase:XB-GENE-5873424
See related
Ensembl:ENSXETG00000016511
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
tmem228; fam189a1
Orthologs
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Genomic context

Location:
chromosome: 3
Exon count:
12
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 3 NC_030679.2 (97250556..97596658, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 3 NC_030679.1 (87564134..87897621, complement)

Chromosome 3 - NC_030679.2Genomic Context describing neighboring genes Neighboring gene methylmalonyl-CoA epimerase Neighboring gene amyloid beta (A4) precursor protein-binding, family A, member 2 Neighboring gene uncharacterized LOC116409768 Neighboring gene tight junction protein 1 Neighboring gene paraneoplastic antigen Ma2 homolog

Genomic regions, transcripts, and products

General protein information

Preferred Names
protein ENTREP2; protein FAM189A1
Names
family with sequence similarity 189 member A1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001078904.1NP_001072372.1  protein ENTREP2

    See identical proteins and their annotated locations for NP_001072372.1

    Status: PROVISIONAL

    Source sequence(s)
    BC121476
    UniProtKB/TrEMBL
    F6V3Q0, Q0V9M1
    Related
    ENSXETP00000036002.4, ENSXETT00000036002.5
    Conserved Domains (1) summary
    pfam04103
    Location:36200
    CD20; CD20-like family

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030679.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    97250556..97596658 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031898054.1XP_031753914.1  protein FAM189A1 isoform X1

    UniProtKB/TrEMBL
    A0A6I8S7K1, A0A8J1J7R8
    Related
    ENSXETP00000088683.2, ENSXETT00000080350.2
    Conserved Domains (1) summary
    pfam04103
    Location:1126
    CD20; CD20-like family