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LHX4 LIM homeobox 4 [ Gallus gallus (chicken) ]

Gene ID: 776024, updated on 17-Aug-2024

Summary

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Symbol
LHX4provided by CGNC
Full Name
LIM homeobox 4provided by CGNC
Primary source
CGNC:1220
See related
Ensembl:ENSGALG00010010858
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
6
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 8 NC_052539.1 (5978396..5986875, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 8 NC_052580.1 (5989910..5998374, complement)

Chromosome 8 - NC_052539.1Genomic Context describing neighboring genes Neighboring gene xenotropic and polytropic retrovirus receptor 1 Neighboring gene uncharacterized LOC121111411 Neighboring gene acyl-CoA binding domain containing 6 Neighboring gene uncharacterized LOC107053940 Neighboring gene quiescin Q6 sulfhydryl oxidase 1 Neighboring gene centrosomal protein 350

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of Genes With Enriched Expression in Early Developing Mouse Cone Photoreceptors. Buenaventura DF, et al. Invest Ophthalmol Vis Sci, 2019 Jul 1. PMID 31260032, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LIM/homeobox protein Lhx4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052539.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    5978396..5986875 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015290492.4 → XP_015145978.3  LIM/homeobox protein Lhx4

    Related
    ENSGALP00010014646.1, ENSGALT00010025990.1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052580.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    5989910..5998374 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040678024.2 → XP_040533958.2  LIM/homeobox protein Lhx4

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials