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SCARF2 scavenger receptor class F, member 2 [ Gallus gallus (chicken) ]

Gene ID: 772263, updated on 17-Aug-2024

Summary

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Official Symbol
SCARF2provided by CGNC
Official Full Name
scavenger receptor class F, member 2provided by CGNC
Primary source
CGNC:57406
See related
Ensembl:ENSGALG00010000143
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
12
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 15 NC_052546.1 (10101771..10114782, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 15 NC_052587.1 (10101119..10115999, complement)

Chromosome 15 - NC_052546.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 7 member 4 Neighboring gene DGCR6 homolog Neighboring gene proline dehydrogenase 1 Neighboring gene reticulon 4 receptor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables scavenger receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
scavenger receptor class F member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052546.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    10101771..10114782 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015275361.4 → XP_015130847.3  scavenger receptor class F member 2 isoform X2

    UniProtKB/TrEMBL
    A0A8V0X4J5
    Conserved Domains (2) summary
    smart00180
    Location:213 → 240
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    PHA03247
    Location:652 → 957
    PHA03247; large tegument protein UL36; Provisional

  2. XM_015275360.4 → XP_015130846.3  scavenger receptor class F member 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0X2B7, A0A8V0X4J5
    Related
    ENSGALP00010000141.1, ENSGALT00010000273.1
    Conserved Domains (2) summary
    smart00180
    Location:213 → 240
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    PHA03247
    Location:653 → 958
    PHA03247; large tegument protein UL36; Provisional

  3. XM_040648225.2 → XP_040504159.1  scavenger receptor class F member 2 isoform X3

    UniProtKB/TrEMBL
    A0A8V0X4J5
    Conserved Domains (2) summary
    smart00180
    Location:91 → 118
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    PHA03247
    Location:531 → 836
    PHA03247; large tegument protein UL36; Provisional

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052587.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    10101119..10115999 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040685099.2 → XP_040541033.1  scavenger receptor class F member 2 isoform X5

    UniProtKB/TrEMBL
    A0A8V0X4J5
    Conserved Domains (2) summary
    smart00180
    Location:368 → 395
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    PHA03247
    Location:807 → 1112
    PHA03247; large tegument protein UL36; Provisional

  2. XM_040685098.2 → XP_040541032.1  scavenger receptor class F member 2 isoform X4

    UniProtKB/TrEMBL
    A0A8V0X4J5
    Conserved Domains (2) summary
    smart00180
    Location:368 → 395
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    PHA03247
    Location:808 → 1113
    PHA03247; large tegument protein UL36; Provisional
Nucleotide Protein
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