U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ZFAND6 zinc finger AN1-type containing 6 [ Pan troglodytes (chimpanzee) ]

Gene ID: 742123, updated on 6-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
ZFAND6
Gene description
zinc finger AN1-type containing 6
Locus tag
CK820_G0039778
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ZFAND6 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 16 NC_072414.2 (72032632..72117423)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 15 NC_072413.1 (72008624..72092295)

Chromosome 16 - NC_072414.2Genomic Context describing neighboring genes Neighboring gene farnesyl pyrophosphate synthase-like Neighboring gene BCL2 related protein A1 Neighboring gene fumarylacetoacetate hydrolase Neighboring gene cortexin domain containing 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Major chimpanzee-specific structural changes in sperm development-associated genes. Kim RN, et al. Funct Integr Genomics, 2011 Sep. PMID 21484476

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein targeting to peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
AN1-type zinc finger protein 6
Names
zinc finger A20 domain-containing protein 3
zinc finger, A20 domain containing 3
zinc finger, AN1-type domain 6

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001246634.1 → NP_001233563.1  AN1-type zinc finger protein 6

    See identical proteins and their annotated locations for NP_001233563.1

    Status: PROVISIONAL

    Source sequence(s)
    AK305253
    UniProtKB/TrEMBL
    A0A2J8KCC9, A0A2J8KCE7, A0A6D2WEK3, G2HET9
    Conserved Domains (2) summary
    smart00154
    Location:149 → 186
    ZnF_AN1; AN1-like Zinc finger
    pfam01754
    Location:12 → 34
    zf-A20; A20-like zinc finger

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072414.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    72032632..72117423
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024348982.3 → XP_024204750.1  AN1-type zinc finger protein 6 isoform X1

    UniProtKB/TrEMBL
    A0A2J8KCC9, A0A2J8KCE7, A0A6D2WEK3, G2HET9
    Conserved Domains (2) summary
    smart00154
    Location:149 → 186
    ZnF_AN1; AN1-like Zinc finger
    pfam01754
    Location:12 → 34
    zf-A20; A20-like zinc finger

  2. XM_024348983.3 → XP_024204751.1  AN1-type zinc finger protein 6 isoform X1

    UniProtKB/TrEMBL
    A0A2J8KCC9, A0A2J8KCE7, A0A6D2WEK3, G2HET9
    Conserved Domains (2) summary
    smart00154
    Location:149 → 186
    ZnF_AN1; AN1-like Zinc finger
    pfam01754
    Location:12 → 34
    zf-A20; A20-like zinc finger

  3. XM_024348984.3 → XP_024204752.1  AN1-type zinc finger protein 6 isoform X1

    UniProtKB/TrEMBL
    A0A2J8KCC9, A0A2J8KCE7, A0A6D2WEK3, G2HET9
    Conserved Domains (2) summary
    smart00154
    Location:149 → 186
    ZnF_AN1; AN1-like Zinc finger
    pfam01754
    Location:12 → 34
    zf-A20; A20-like zinc finger

  4. XM_054666816.2 → XP_054522791.1  AN1-type zinc finger protein 6 isoform X1

    UniProtKB/TrEMBL
    A0A2J8KCC9, A0A2J8KCE7, A0A6D2WEK3, G2HET9

  5. XM_063794028.1 → XP_063650098.1  AN1-type zinc finger protein 6 isoform X1

    UniProtKB/TrEMBL
    A0A2J8KCC9, A0A2J8KCE7, A0A6D2WEK3, G2HET9

  6. XM_063794029.1 → XP_063650099.1  AN1-type zinc finger protein 6 isoform X1

    UniProtKB/TrEMBL
    A0A2J8KCC9, A0A2J8KCE7, A0A6D2WEK3, G2HET9

  7. XM_054666815.2 → XP_054522790.1  AN1-type zinc finger protein 6 isoform X1

    UniProtKB/TrEMBL
    A0A2J8KCC9, A0A2J8KCE7, A0A6D2WEK3, G2HET9

  8. XM_024348985.3 → XP_024204753.1  AN1-type zinc finger protein 6 isoform X1

    UniProtKB/TrEMBL
    A0A2J8KCC9, A0A2J8KCE7, A0A6D2WEK3, G2HET9
    Conserved Domains (2) summary
    smart00154
    Location:149 → 186
    ZnF_AN1; AN1-like Zinc finger
    pfam01754
    Location:12 → 34
    zf-A20; A20-like zinc finger
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials