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RUNDC3A RUN domain containing 3A [ Pan troglodytes (chimpanzee) ]

Gene ID: 739215, updated on 29-Mar-2024

Summary

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Official Symbol
RUNDC3Aprovided by VGNC
Official Full Name
RUN domain containing 3Aprovided by VGNC
Primary source
VGNC:VGNC:51730
Locus tag
CK820_G0050748
See related
Ensembl:ENSPTRG00000009271
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See RUNDC3A in Genome Data Viewer
Location:
chromosome: 17
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 19 NC_072417.2 (23582961..23593133, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 17 NC_072415.1 (21822457..21833116, complement)

Chromosome 19 - NC_072417.2Genomic Context describing neighboring genes Neighboring gene granulin precursor Neighboring gene solute carrier family 25 member 39 Neighboring gene uncharacterized LOC104002822 Neighboring gene U6 spliceosomal RNA Neighboring gene small nucleolar RNA U3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of cGMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RUN domain-containing protein 3A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072417.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    23582961..23593133 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016931659.4 → XP_016787148.1  RUN domain-containing protein 3A isoform X3

    UniProtKB/TrEMBL
    H2R9R5
    Conserved Domains (2) summary
    pfam02759
    Location:60 → 181
    RUN; RUN domain
    pfam06785
    Location:233 → 313
    UPF0242; Uncharacterized protein family (UPF0242)

  2. XM_016931657.4 → XP_016787146.1  RUN domain-containing protein 3A isoform X2

    UniProtKB/TrEMBL
    A0A2J8J4J0, A0A6D2WGU2, H2R9R5, H2RHZ7
    Related
    ENSPTRP00000061153.2
    Conserved Domains (2) summary
    pfam02759
    Location:60 → 186
    RUN; RUN domain
    pfam06785
    Location:238 → 318
    UPF0242; Uncharacterized protein family (UPF0242)

  3. XM_016931658.4 → XP_016787147.1  RUN domain-containing protein 3A isoform X1

    UniProtKB/TrEMBL
    H2R9R5
    Conserved Domains (2) summary
    pfam02759
    Location:60 → 182
    RUN; RUN domain
    pfam06785
    Location:251 → 314
    UPF0242; Uncharacterized protein family (UPF0242)

  4. XM_016931661.4 → XP_016787150.1  RUN domain-containing protein 3A isoform X5

    UniProtKB/TrEMBL
    A0A2J8J4H9, H2R9R5
    Conserved Domains (2) summary
    pfam02759
    Location:60 → 181
    RUN; RUN domain
    pfam06785
    Location:233 → 313
    UPF0242; Uncharacterized protein family (UPF0242)

  5. XM_016931660.4 → XP_016787149.1  RUN domain-containing protein 3A isoform X4

    UniProtKB/TrEMBL
    A0A2J8J4I0, H2R9R5
    Conserved Domains (2) summary
    pfam02759
    Location:60 → 186
    RUN; RUN domain
    pfam06785
    Location:238 → 318
    UPF0242; Uncharacterized protein family (UPF0242)
Nucleotide Protein
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