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smox spermine oxidase [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 733959, updated on 17-Aug-2024

Summary

Official Symbol
smoxprovided by Xenbase
Official Full Name
spermine oxidaseprovided by Xenbase
Primary source
Xenbase:XB-GENE-5840847
See related
Ensembl:ENSXETG00000017992
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
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Genomic context

Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 1 NC_030677.2 (12084047..12100983, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) Unplaced Scaffold NW_016683769.1 (55302..71107)

Chromosome 1 - NC_030677.2Genomic Context describing neighboring genes Neighboring gene trace amine-associated receptor 1 Neighboring gene acanthoscurrin-2-like Neighboring gene ring finger protein 24 Neighboring gene serine/threonine-protein kinase N2-like Neighboring gene uncharacterized LOC116411625

Genomic regions, transcripts, and products

General protein information

Preferred Names
spermine oxidase
NP_001039135.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001045670.1NP_001039135.1  spermine oxidase

    See identical proteins and their annotated locations for NP_001039135.1

    Status: PROVISIONAL

    Source sequence(s)
    CR942507
    UniProtKB/TrEMBL
    A0A6I8RTU9, F7BMZ2, Q28C17
    Related
    ENSXETP00000039007.2, ENSXETT00000039007.4
    Conserved Domains (1) summary
    PLN02568
    Location:23526
    PLN02568; polyamine oxidase

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    12084047..12100983 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)