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gnpat glyceronephosphate O-acyltransferase [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 733943, updated on 25-Apr-2024

Summary

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Official Symbol
gnpatprovided by Xenbase
Official Full Name
glyceronephosphate O-acyltransferaseprovided by Xenbase
Primary source
Xenbase:XB-GENE-948374
See related
Ensembl:ENSXETG00000022535
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
dhapat
Orthologs
human mouse all
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Genomic context

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See gnpat in Genome Data Viewer
Location:
chromosome: 5
Exon count:
16
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 5 NC_030681.2 (50202684..50224104)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 5 NC_030681.1 (39554366..39575737)

Chromosome 5 - NC_030681.2Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 67 Neighboring gene chromosome 5 C1orf131 homolog Neighboring gene delta-like 1 Neighboring gene family with sequence similarity 120 member B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC146391

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables acyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables glycerone-phosphate O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within ether lipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within glycerophospholipid metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in peroxisomal membrane IEA
Inferred from Electronic Annotation
more info
  
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
dihydroxyacetone phosphate acyltransferase
NP_001073039.1
XP_012818567.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001079571.1 → NP_001073039.1  dihydroxyacetone phosphate acyltransferase

    See identical proteins and their annotated locations for NP_001073039.1

    Status: PROVISIONAL

    Source sequence(s)
    BC121963
    UniProtKB/TrEMBL
    A0A6I8PW13, F6U5E2, F6UG98, Q0P4P3
    Related
    ENSXETP00000048781.4, ENSXETT00000048781.5
    Conserved Domains (2) summary
    cd07993
    Location:121 → 324
    LPLAT_DHAPAT-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like
    PTZ00374
    Location:54 → 513
    PTZ00374; dihydroxyacetone phosphate acyltransferase; Provisional

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030681.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    50202684..50224104
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012963113.3 → XP_012818567.1  dihydroxyacetone phosphate acyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A6I8PW13, A0A8J0SEE1
    Conserved Domains (1) summary
    cd07993
    Location:120 → 323
    LPLAT_DHAPAT-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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