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ERCC6 ERCC excision repair 6, chromatin remodeling factor [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 710153, updated on 5-Mar-2024

Summary

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Official Symbol
ERCC6provided by VGNC
Official Full Name
ERCC excision repair 6, chromatin remodeling factorprovided by VGNC
Primary source
VGNC:VGNC:81396
See related
Ensembl:ENSMMUG00000017943
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See ERCC6 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
25
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (47854243..47938559)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (43537806..43619039, complement)

Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene chromosome 9 C10orf53 homolog Neighboring gene choline O-acetyltransferase Neighboring gene solute carrier family 18 member A3 Neighboring gene dorsal root ganglia homeobox Neighboring gene chromosome 9 C10orf71 homolog Neighboring gene uncharacterized LOC107000122

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent chromatin remodeler activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transcription-coupled nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA excision repair protein ERCC-6; chimeric ERCC6-PGBD3 protein
Names
excision repair cross-complementing rodent repair deficiency, complementation group 6
XP_015002511.1
XP_015002513.1
XP_028682164.1
XP_028682165.1
XP_028682166.1
XP_028682167.1
XP_028682168.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041762.1 Reference Mmul_10 Primary Assembly

    Range
    47854243..47938559
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015147027.2 → XP_015002513.1  chimeric ERCC6-PGBD3 protein isoform X5

    UniProtKB/TrEMBL
    F7EM96, H9YUI3
    Related
    ENSMMUP00000023589.4, ENSMMUT00000025213.4
    Conserved Domains (2) summary
    pfam13843
    Location:612 → 970
    DDE_Tnp_1_7; Transposase IS4
    cl00040
    Location:1022 → 1058
    C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...

  2. XM_028826331.1 → XP_028682164.1  DNA excision repair protein ERCC-6 isoform X1

    UniProtKB/TrEMBL
    G7N1X8, H9Z691
    Conserved Domains (2) summary
    COG0553
    Location:502 → 1050
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    cd18000
    Location:550 → 737
    DEXHc_ERCC6; DEXH-box helicase domain of ERCC6

  3. XM_015147025.2 → XP_015002511.1  DNA excision repair protein ERCC-6 isoform X2

    UniProtKB/TrEMBL
    F7EMA2, G7N1X8, H9Z691
    Related
    ENSMMUP00000023588.2, ENSMMUT00000025212.3
    Conserved Domains (3) summary
    cd00046
    Location:530 → 680
    DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
    cd00079
    Location:833 → 963
    HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
    pfam00176
    Location:513 → 815
    SNF2_N; SNF2 family N-terminal domain

  4. XM_028826335.1 → XP_028682168.1  chimeric ERCC6-PGBD3 protein isoform X4

    UniProtKB/TrEMBL
    A0A5F8AEE0
    Related
    ENSMMUP00000076296.1, ENSMMUT00000085522.1
    Conserved Domains (2) summary
    pfam13843
    Location:652 → 1010
    DDE_Tnp_1_7; Transposase IS4
    cl00040
    Location:1062 → 1098
    C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...

  5. XM_028826332.1 → XP_028682165.1  DNA excision repair protein ERCC-6 isoform X1

    UniProtKB/TrEMBL
    G7N1X8, H9Z691
    Conserved Domains (2) summary
    COG0553
    Location:502 → 1050
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    cd18000
    Location:550 → 737
    DEXHc_ERCC6; DEXH-box helicase domain of ERCC6

  6. XM_028826333.1 → XP_028682166.1  DNA excision repair protein ERCC-6 isoform X1

    UniProtKB/TrEMBL
    G7N1X8, H9Z691
    Conserved Domains (2) summary
    COG0553
    Location:502 → 1050
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    cd18000
    Location:550 → 737
    DEXHc_ERCC6; DEXH-box helicase domain of ERCC6

  7. XM_028826334.1 → XP_028682167.1  DNA excision repair protein ERCC-6 isoform X3

    UniProtKB/TrEMBL
    H9F6B7
    Conserved Domains (2) summary
    COG0553
    Location:236 → 784
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    cd18000
    Location:284 → 471
    DEXHc_ERCC6; DEXH-box helicase domain of ERCC6

RNA

  1. XR_003719302.1 RNA Sequence

    Related
    ENSMMUT00000025211.4
Nucleotide Protein
Heading Accession and Version

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