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SLCO1C1 solute carrier organic anion transporter family member 1C1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 704740, updated on 5-Mar-2024

Summary

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Official Symbol
SLCO1C1provided by VGNC
Official Full Name
solute carrier organic anion transporter family member 1C1provided by VGNC
Primary source
VGNC:VGNC:77697
Locus tag
EGK_03444
See related
Ensembl:ENSMMUG00000008271
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See SLCO1C1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
16
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (22140947..22197860)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (21660705..21717830)

Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene phosphodiesterase 3A Neighboring gene ubiquitin-conjugating enzyme E2 L3 pseudogene Neighboring gene solute carrier organic anion transporter family member 1B3 Neighboring gene solute carrier organic anion transporter family member 1B7 (putative)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Thyroid Hormone Transporters MCT8 and OATP1C1 Are Expressed in Projection Neurons and Interneurons of Basal Ganglia and Motor Thalamus in the Adult Human and Macaque Brains. Wang T, et al. Int J Mol Sci, 2023 Jun 1. PMID 37298594, Free PMC Article
  2. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  3. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Thyroid Hormone Transporters MCT8 and OATP1C1 Are Expressed in Projection Neurons and Interneurons of Basal Ganglia and Motor Thalamus in the Adult Human and Macaque Brains.
    Title: Thyroid Hormone Transporters MCT8 and OATP1C1 Are Expressed in Projection Neurons and Interneurons of Basal Ganglia and Motor Thalamus in the Adult Human and Macaque Brains.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables bile acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sodium-independent organic anion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bile acid and bile salt transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium-independent organic anion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier organic anion transporter family member 1C1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041764.1 Reference Mmul_10 Primary Assembly

    Range
    22140947..22197860
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002798488.3 → XP_002798534.1  solute carrier organic anion transporter family member 1C1 isoform X1

    See identical proteins and their annotated locations for XP_002798534.1

    UniProtKB/TrEMBL
    A0A1D5QYP5, A0A5K1VTR2
    Conserved Domains (1) summary
    cd17459
    Location:42 → 579
    MFS_SLCO1C_OATP1C; Solute carrier organic anion transporter 1C subfamily of the Major Facilitator Superfamily of transporters

  2. XM_015151244.2 → XP_015006730.1  solute carrier organic anion transporter family member 1C1 isoform X3

    UniProtKB/TrEMBL
    A0A1D5QL08, A0A1D5QYP5
    Related
    ENSMMUP00000048733.2, ENSMMUT00000076529.2
    Conserved Domains (1) summary
    cd17459
    Location:42 → 579
    MFS_SLCO1C_OATP1C; Solute carrier organic anion transporter 1C subfamily of the Major Facilitator Superfamily of transporters

  3. XM_015151243.2 → XP_015006729.1  solute carrier organic anion transporter family member 1C1 isoform X2

    UniProtKB/TrEMBL
    A0A1D5QYP5
    Conserved Domains (1) summary
    cd17459
    Location:42 → 579
    MFS_SLCO1C_OATP1C; Solute carrier organic anion transporter 1C subfamily of the Major Facilitator Superfamily of transporters

  4. XM_028829309.1 → XP_028685142.1  solute carrier organic anion transporter family member 1C1 isoform X4

    UniProtKB/TrEMBL
    A0A1D5QYP5
    Conserved Domains (1) summary
    cl28910
    Location:42 → 497
    MFS; Major Facilitator Superfamily

  5. XM_015151242.2 → XP_015006728.1  solute carrier organic anion transporter family member 1C1 isoform X1

    UniProtKB/TrEMBL
    A0A1D5QYP5, A0A5K1VTR2
    Conserved Domains (1) summary
    cd17459
    Location:42 → 579
    MFS_SLCO1C_OATP1C; Solute carrier organic anion transporter 1C subfamily of the Major Facilitator Superfamily of transporters
Nucleotide Protein
Heading Accession and Version

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