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LOC6729951 putative polypeptide N-acetylgalactosaminyltransferase 13 [ Drosophila simulans ]

Gene ID: 6729951, updated on 10-May-2024

Summary

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Gene symbol
LOC6729951
Gene description
putative polypeptide N-acetylgalactosaminyltransferase 13
Locus tag
Dsimw501_GD18021
See related
EnsemblRapid:LOC6729951
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila simulans
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GD18021; GD18021-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6729951 in Genome Data Viewer
Location:
chromosome: 3R
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Prin_Dsim_3.1 (GCF_016746395.2) 3R NC_052523.2 (24885307..24888649, complement)
102 previous assembly Prin_Dsim_3.0 (GCF_016746395.1) 3R NC_052523.1 (24885346..24888744, complement)

Chromosome 3R - NC_052523.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6729949 Neighboring gene Allatostatin A receptor 2 Neighboring gene uncharacterized protein DDB_G0287625 Neighboring gene uncharacterized LOC6729953

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative polypeptide N-acetylgalactosaminyltransferase 13
Names
Dsim\GD18021
Dsim\GD18021-PA
dsim_GLEANR_1852

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila simulans Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prin_Dsim_3.1

Genomic

  1. NC_052523.2 Reference Prin_Dsim_3.1

    Range
    24885307..24888649 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002105210.4 → XP_002105246.1  putative polypeptide N-acetylgalactosaminyltransferase 13 isoform X1

    See identical proteins and their annotated locations for XP_002105246.1

    UniProtKB/TrEMBL
    B4QYT0
    Related
    XP_002105246.1, XM_002105210.4
    Conserved Domains (2) summary
    cd02510
    Location:114 → 423
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:436 → 549
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_039295135.2 → XP_039151069.1  putative polypeptide N-acetylgalactosaminyltransferase 13 isoform X2

    Related
    XP_039151069.1, XM_039295135.2
    Conserved Domains (1) summary
    cl11394
    Location:114 → 356
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein Strain
Heading Accession and Version

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