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Ola1 Obg-like ATPase 1 [ Mus musculus (house mouse) ]

Gene ID: 67059, updated on 8-Jun-2024

Summary

Official Symbol
Ola1provided by MGI
Official Full Name
Obg-like ATPase 1provided by MGI
Primary source
MGI:MGI:1914309
See related
Ensembl:ENSMUSG00000027108 AllianceGenome:MGI:1914309
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gtpbp9; PTD004; 2510025G09Rik; 2810405J23Rik; 2810409H07Rik
Summary
Predicted to enable ATP binding activity and ATP hydrolysis activity. Predicted to be involved in ATP metabolic process. Predicted to be located in centrosome and cytosol. Predicted to be active in cytoplasm. Orthologous to human OLA1 (Obg like ATPase 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in CNS E11.5 (RPKM 15.1), liver E14 (RPKM 14.7) and 22 other tissues See more
Orthologs
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Genomic context

See Ola1 in Genome Data Viewer
Location:
2 C3; 2 43.35 cM
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (72923145..73044791, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (73092801..73214447, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_04828 Neighboring gene trans-acting transcription factor 3 Neighboring gene STARR-seq mESC enhancer starr_04829 Neighboring gene STARR-positive B cell enhancer mm9_chr2:72835176-72835477 Neighboring gene STARR-positive B cell enhancer mm9_chr2:72841087-72841388 Neighboring gene trans-acting transcription factor 3, opposite strand Neighboring gene STARR-seq mESC enhancer starr_04832 Neighboring gene predicted gene, 39850 Neighboring gene STARR-positive B cell enhancer mm9_chr2:72878181-72878481 Neighboring gene STARR-seq mESC enhancer starr_04835 Neighboring gene STARR-seq mESC enhancer starr_04836 Neighboring gene ribosomal protein L17 pseudogene Neighboring gene ribosomal protein L7A pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E2622 Neighboring gene trans-acting transcription factor 9 Neighboring gene corepressor interacting with RBPJ, 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (3) 
  • Gene trapped (1) 
  • Targeted (4)  1 citation

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables ATP binding ISO
Inferred from Sequence Orthology
more info
 
enables ATP hydrolysis activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables ATP hydrolysis activity ISO
Inferred from Sequence Orthology
more info
 
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in ATP metabolic process ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in centrosome ISO
Inferred from Sequence Orthology
more info
 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
obg-like ATPase 1
Names
GTP-binding protein 9 (putative)
GTP-binding protein PTD004
NP_080218.1
NP_084367.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_025942.2NP_080218.1  obg-like ATPase 1 isoform a

    See identical proteins and their annotated locations for NP_080218.1

    Status: VALIDATED

    Source sequence(s)
    AK010817, AK013055, BX521012
    Consensus CDS
    CCDS16124.1
    UniProtKB/Swiss-Prot
    B1AYJ8, B1AYK0, Q9CWE2, Q9CX91, Q9CYC9, Q9CZ30, Q9CZ56
    UniProtKB/TrEMBL
    Q3TJF2
    Related
    ENSMUSP00000028517.7, ENSMUST00000028517.13
    Conserved Domains (1) summary
    PTZ00258
    Location:1390
    PTZ00258; GTP-binding protein; Provisional
  2. NM_030091.1NP_084367.1  obg-like ATPase 1 isoform b

    Status: VALIDATED

    Source sequence(s)
    AK013055, BG069761
    Consensus CDS
    CCDS16125.1
    UniProtKB/TrEMBL
    B1AYJ9
    Related
    ENSMUSP00000097592.5, ENSMUST00000100015.6
    Conserved Domains (1) summary
    cd01900
    Location:25242
    YchF; YchF GTPase

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    72923145..73044791 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)