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LOC6633414 probable RNA-binding protein 19 [ Drosophila virilis ]

Gene ID: 6633414, updated on 10-May-2024

Summary

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Gene symbol
LOC6633414
Gene description
probable RNA-binding protein 19
Locus tag
Dvir_GJ16680
See related
EnsemblRapid:LOC6633414
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila virilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
Also known as
GJ16680; GJ16680-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6633414 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
103 current DvirRS2 (GCF_003285735.1) Unplaced Scaffold NW_022587371.1 (1437472..1440676)

NW_022587371.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein L7A Neighboring gene serine--pyruvate aminotransferase, mitochondrial Neighboring gene active breakpoint cluster region-related protein Neighboring gene scoloptoxin SSD14

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022587371 Unplaced Scaffold Reference DvirRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable RNA-binding protein 19
Names
Dvir\GJ16680
Dvir\GJ16680-PA
dvir_GLEANR_17184

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila virilis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DvirRS2

Genomic

  1. NW_022587371.1 Reference DvirRS2

    Range
    1437472..1440676
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002056777.3 → XP_002056813.1  probable RNA-binding protein 19

    See identical proteins and their annotated locations for XP_002056813.1

    UniProtKB/TrEMBL
    B4M823
    Related
    XP_002056813.1, XM_002056777.3
    Conserved Domains (6) summary
    COG0724
    Location:657 → 844
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12318
    Location:679 → 760
    RRM5_RBM19_like; RNA recognition motif 5 in RNA-binding protein 19 (RBM19 or RBD-1) and similar proteins
    cd12564
    Location:2 → 77
    RRM1_RBM19; RNA recognition motif 1 in RNA-binding protein 19 (RBM19) and similar proteins
    cd12569
    Location:552 → 623
    RRM4_RBM19; RNA recognition motif 4 in RNA-binding protein 19 (RBM19) and similar proteins
    cd12571
    Location:784 → 863
    RRM6_RBM19; RNA recognition motif 6 in RNA-binding protein 19 (RBM19) and similar proteins
    cl17169
    Location:362 → 440
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein Strain
Heading Accession and Version

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