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rhea Talin_middle and talin-RS domain-containing protein rhea [ Drosophila persimilis ]

Gene ID: 6599459, updated on 16-May-2024

Summary

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Gene symbol
rhea
Gene description
Talin_middle and talin-RS domain-containing protein rhea
Locus tag
Dper_GL22532
See related
EnsemblRapid:LOC6599459
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila persimilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GL22532; GL22532-PA
Orthologs
fruit fly all
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Genomic context

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See rhea in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
101 current DperRS2 (GCF_003286085.1) Unplaced Scaffold NW_020825364.1 (72087..105082, complement)

NW_020825364.1Genomic Context describing neighboring genes Neighboring gene glycylpeptide N-tetradecanoyltransferase Neighboring gene ATP-dependent DNA helicase Q4 Neighboring gene protein ERGIC-53 Neighboring gene zinc finger protein 668

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020825364 Unplaced Scaffold Reference DperRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ruffle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
talin-2
Names
Dper\GL22532
Dper\GL22532-PA
dper_GLEANR_4773

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila persimilis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DperRS2

Genomic

  1. NW_020825364.1 Reference DperRS2

    Range
    72087..105082 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026993613.1 → XP_026849414.1  talin-2

    UniProtKB/TrEMBL
    B4H179
    Related
    XP_026849414.1, XM_026993613.1
    Conserved Domains (9) summary
    cd12150
    Location:1661 → 1832
    talin-RS; rod-segment of the talin C-terminal domain
    smart00295
    Location:89 → 322
    B41; Band 4.1 homologues
    COG1511
    Location:773 → 1167
    YhgE; Uncharacterized membrane protein YhgE, phage infection protein (PIP) family [Function unknown]
    cd10569
    Location:318 → 409
    FERM_C_Talin; FERM domain C-lobe/F3 of Talin
    pfam08913
    Location:1859 → 1982
    VBS; Vinculin Binding Site
    cd17090
    Location:88 → 205
    FERM_F1_TLN; FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F1 sub-domain, found in Talin and similar proteins
    pfam01608
    Location:2392 → 2528
    I_LWEQ; I/LWEQ domain
    pfam09141
    Location:510 → 668
    Talin_middle; Talin, middle domain
    pfam16511
    Location:4 → 85
    FERM_f0; N-terminal or F0 domain of Talin-head FERM
Nucleotide Protein
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