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LOC6596118 tonsoku-like protein [ Drosophila persimilis ]

Gene ID: 6596118, updated on 10-May-2024

Summary

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Gene symbol
LOC6596118
Gene description
tonsoku-like protein
Locus tag
Dper_GL25090
See related
EnsemblRapid:LOC6596118
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila persimilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GL25090; GL25090-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6596118 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current DperRS2 (GCF_003286085.1) Unplaced Scaffold NW_020825312.1 (3796011..3800640)

NW_020825312.1Genomic Context describing neighboring genes Neighboring gene Isoleucyl-tRNA synthetase, mitochondrial Neighboring gene integrator complex subunit 9 Neighboring gene Zinc-finger protein 72D Neighboring gene ankyrin-2 Neighboring gene Medium-chain acyl-CoA dehydrogenase Neighboring gene uncharacterized LOC6597163

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020825312 Unplaced Scaffold Reference DperRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables aspartic-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tonsoku-like protein
Names
Dper\GL25090
Dper\GL25090-PA
dper_GLEANR_7468

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila persimilis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DperRS2

Genomic

  1. NW_020825312.1 Reference DperRS2

    Range
    3796011..3800640
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002020930.2 → XP_002020966.1  tonsoku-like protein

    See identical proteins and their annotated locations for XP_002020966.1

    UniProtKB/TrEMBL
    B4GQT7
    Related
    XP_002020966.1, XM_002020930.2
    Conserved Domains (8) summary
    COG0457
    Location:68 → 387
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    cd00116
    Location:1079 → 1232
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    cd00204
    Location:533 → 645
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00034
    Location:1087 → 1114
    LRR_AMN1; leucine-rich repeat [structural motif]
    sd00006
    Location:163 → 191
    TPR; TPR repeat [structural motif]
    pfam12796
    Location:541 → 637
    Ank_2; Ankyrin repeats (3 copies)
    pfam13424
    Location:19 → 95
    TPR_12; Tetratricopeptide repeat
    sd00045
    Location:537 → 567
    ANK; ANK repeat [structural motif]
Nucleotide Protein
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