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LOC6593388 RNA-binding motif protein, X-linked 2 [ Drosophila persimilis ]

Gene ID: 6593388, updated on 10-May-2024

Summary

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Gene symbol
LOC6593388
Gene description
RNA-binding motif protein, X-linked 2
Locus tag
Dper_GL26176
See related
EnsemblRapid:LOC6593388
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila persimilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GL26176; GL26176-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6593388 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
101 current DperRS2 (GCF_003286085.1) Unplaced Scaffold NW_020825294.1 (1479853..1480381, complement)

NW_020825294.1Genomic Context describing neighboring genes Neighboring gene probable phospholipid-transporting ATPase IIB Neighboring gene female sterile (2) ltoPP43 Neighboring gene UV-resistance associated gene Neighboring gene GTPase-activating protein CdGAPr Neighboring gene U2 spliceosomal RNA Neighboring gene C-type lectin 37Db

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020825294 Unplaced Scaffold Reference DperRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U2 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of precatalytic spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA-binding motif protein, X-linked 2
Names
Dper\GL26176
Dper\GL26176-PA
dper_GLEANR_8704

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila persimilis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DperRS2

Genomic

  1. NW_020825294.1 Reference DperRS2

    Range
    1479853..1480381 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002019050.2 → XP_002019086.1  RNA-binding motif protein, X-linked 2

    See identical proteins and their annotated locations for XP_002019086.1

    UniProtKB/TrEMBL
    B4GKW6
    Related
    XP_002019086.1, XM_002019050.2
    Conserved Domains (2) summary
    COG0724
    Location:37 → 156
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12411
    Location:26 → 114
    RRM_ist3_like; RNA recognition motif in ist3 family
Nucleotide Protein
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