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Ercc1 DNA excision repair protein Ercc1 [ Drosophila ananassae ]

Gene ID: 6495669, updated on 16-May-2024

Summary

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Gene symbol
Ercc1
Gene description
DNA excision repair protein Ercc1
Locus tag
Dana_GF12823
See related
EnsemblRapid:LOC6495669
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila ananassae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GF12823; GF12823-PA
Orthologs
fruit fly all
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Genomic context

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See Ercc1 in Genome Data Viewer
Location:
chromosome: 3L
Exon count:
2
Annotation release Status Assembly Chr Location
102 current ASM1763931v2 (GCF_017639315.1) 3L NC_057929.1 (5439805..5440807)
101 previous assembly DanaRS2.1 (GCF_003285975.2) Unplaced Scaffold NW_022473265.1 (12437471..12438475, complement)

Chromosome 3L - NC_057929.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6494945 Neighboring gene uncharacterized LOC6494944 Neighboring gene cytosolic iron-sulfur assembly component 1 Neighboring gene Hermansky-Pudlak syndrome 1 protein Neighboring gene transmembrane protein 177

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables damaged DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UV-damage excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in meiotic mismatch repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ERCC4-ERCC1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nucleotide-excision repair factor 1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA excision repair protein ERCC-1
Names
Dana\GF12823
Dana\GF12823-PA
dana_GLEANR_12841

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila ananassae Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1763931v2

Genomic

  1. NC_057929.1 Reference ASM1763931v2

    Range
    5439805..5440807
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001959315.4 → XP_001959351.1  DNA excision repair protein ERCC-1

    See identical proteins and their annotated locations for XP_001959351.1

    UniProtKB/TrEMBL
    B3MC73
    Related
    XP_001959351.1, XM_001959315.4
    Conserved Domains (2) summary
    pfam03834
    Location:39 → 153
    Rad10; Binding domain of DNA repair protein Ercc1 (rad10/Swi10)
    pfam14520
    Location:179 → 231
    HHH_5; Helix-hairpin-helix domain
Nucleotide Protein Strain
Heading Accession and Version

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